BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029573
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31326.3| unnamed protein product [Vitis vinifera]              211   4e-53
ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi...   211   4e-53
emb|CAN65544.1| hypothetical protein VITISV_018576 [Vitis vinifera]   211   4e-53
ref|XP_002888838.1| pentatricopeptide repeat-containing protein ...   206   2e-51
ref|NP_177302.1| pentatricopeptide repeat-containing protein [Ar...   202   2e-50

>emb|CBI31326.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  211 bits (538), Expect = 4e-53
 Identities = 103/171 (60%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
 Frame = -1

Query: 511 RKMLRSKTDPNEVTFVAVLSACGQLGAFESGKWIHAYMQNNR-IQMNVHVGTALIDMYSK 335
           R M R    PN V    +L   G++GA++ G+ +HAY+   +     V + +ALIDMY K
Sbjct: 134 RWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCK 193

Query: 334 CGDMVSGRKVFYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVTVNTI 155
           CGDM SGR+VFY S+ERN VSWTALMSGY +NGRL+QALRSI WMQQE F+PDVVTV T+
Sbjct: 194 CGDMASGRQVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATV 253

Query: 154 IPVCGKLKALKQGKEIHCFAVKNGFVRQVSITTSLMMMYAKCGSHGYSVKL 2
           +PVC +L+AL+QGKEIH +AVKNGF+  VSI TSLM+MY+KCG+  YS KL
Sbjct: 254 LPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKL 304



 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 54/154 (35%), Positives = 78/154 (50%)
 Frame = -1

Query: 484 PNEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSKCGDMVSGRKV 305
           P+ VT   VL  C +L A   GK IH+Y   N    NV + T+L+ MYSKCG++    K+
Sbjct: 245 PDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKL 304

Query: 304 FYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVTVNTIIPVCGKLKAL 125
           F G   RN +SWTA++  Y                     +PD V +  I+ +CG+L+ L
Sbjct: 305 FDGMDARNVISWTAMIDSY--------------------HRPDSVAMARILSICGELRVL 344

Query: 124 KQGKEIHCFAVKNGFVRQVSITTSLMMMYAKCGS 23
           K GKEIH   +K  F     ++  ++ MY K G+
Sbjct: 345 KLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGA 378



 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 51/136 (37%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
 Frame = -1

Query: 430 FESGKWIHAYMQNNRIQMNVHVGTALIDMYSKCGDMVSGRKVFYGSSERNTVSWTALMSG 251
           F  G   HA +  N +  +  + T+LIDMY KCG +   R +F    ER+ V W A+++G
Sbjct: 60  FRQGLKAHALLIKNGLVDSSILRTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAG 119

Query: 250 YAANGRLEQALRSIVWMQQERFKPDVVTVNTIIPVCGKLKALKQGKEIHCFAVK-NGFVR 74
           +  N    +AL  + WM++E   P+ V + TI+PV G++ A K G+E+H + VK   + +
Sbjct: 120 FGHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSK 179

Query: 73  QVSITTSLMMMYAKCG 26
           QV I ++L+ MY KCG
Sbjct: 180 QVFIQSALIDMYCKCG 195



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/121 (26%), Positives = 55/121 (45%)
 Frame = -1

Query: 505 MLRSKTDPNEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSKCGD 326
           M+ S   P+ V    +LS CG+L   + GK IH  +     +    V   +I MY K G 
Sbjct: 319 MIDSYHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGA 378

Query: 325 MVSGRKVFYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVTVNTIIPV 146
           +   +  F     + +++WTA++  Y  N   + A+     MQ + F P+  T   ++ +
Sbjct: 379 ISKAKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVLSI 438

Query: 145 C 143
           C
Sbjct: 439 C 439


>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Vitis vinifera]
          Length = 725

 Score =  211 bits (538), Expect = 4e-53
 Identities = 103/171 (60%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
 Frame = -1

Query: 511 RKMLRSKTDPNEVTFVAVLSACGQLGAFESGKWIHAYMQNNR-IQMNVHVGTALIDMYSK 335
           R M R    PN V    +L   G++GA++ G+ +HAY+   +     V + +ALIDMY K
Sbjct: 344 RWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCK 403

Query: 334 CGDMVSGRKVFYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVTVNTI 155
           CGDM SGR+VFY S+ERN VSWTALMSGY +NGRL+QALRSI WMQQE F+PDVVTV T+
Sbjct: 404 CGDMASGRQVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATV 463

Query: 154 IPVCGKLKALKQGKEIHCFAVKNGFVRQVSITTSLMMMYAKCGSHGYSVKL 2
           +PVC +L+AL+QGKEIH +AVKNGF+  VSI TSLM+MY+KCG+  YS KL
Sbjct: 464 LPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKL 514



 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/154 (38%), Positives = 87/154 (56%)
 Frame = -1

Query: 484 PNEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSKCGDMVSGRKV 305
           P+ VT   VL  C +L A   GK IH+Y   N    NV + T+L+ MYSKCG++    K+
Sbjct: 455 PDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKL 514

Query: 304 FYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVTVNTIIPVCGKLKAL 125
           F G   RN +SWTA++  Y  NG L +A+     MQ  + +PD V +  I+ +CG+L+ L
Sbjct: 515 FDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDSVAMARILSICGELRVL 574

Query: 124 KQGKEIHCFAVKNGFVRQVSITTSLMMMYAKCGS 23
           K GKEIH   +K  F     ++  ++ MY K G+
Sbjct: 575 KLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGA 608



 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
 Frame = -1

Query: 514 FRKMLRSKTDPNEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSK 335
           + +M     + N  +F  ++ +     AF  G   HA +  N +  +  + T+LIDMY K
Sbjct: 242 YSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRTSLIDMYFK 301

Query: 334 CGDMVSGRKVFYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVTVNTI 155
           CG +   R +F    ER+ V W A+++G+  N    +AL  + WM++E   P+ V + TI
Sbjct: 302 CGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTI 361

Query: 154 IPVCGKLKALKQGKEIHCFAVK-NGFVRQVSITTSLMMMYAKCG 26
           +PV G++ A K G+E+H + VK   + +QV I ++L+ MY KCG
Sbjct: 362 LPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCG 405



 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
 Frame = -1

Query: 481 NEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSKCGDMVSGRKVF 302
           N  TF ++L AC +  +   GK IH +++ N ++ N  + T L+ MY+ CG +   R VF
Sbjct: 150 NPTTFSSLLRACVESKSLTHGKQIHVHIRINGLENNEFLRTKLVHMYTSCGSLEDARGVF 209

Query: 301 YGSSERNTVSWTALMSGYAANGR--LEQALRSIVWMQQERFKPDVVTVNTIIPVCGKLKA 128
            G S ++  +W AL+ G   +GR    +AL +   M++   + +V + + +I       A
Sbjct: 210 DGVSSKSVYTWNALLRGNVISGRRHYREALSTYSEMRELGVELNVYSFSCMIKSFAGATA 269

Query: 127 LKQGKEIHCFAVKNGFVRQVSITTSLMMMYAKCG 26
            +QG + H   +KNG V    + TSL+ MY KCG
Sbjct: 270 FRQGLKAHALLIKNGLVDSSILRTSLIDMYFKCG 303



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/124 (28%), Positives = 57/124 (45%)
 Frame = -1

Query: 514 FRKMLRSKTDPNEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSK 335
           FR M  SK  P+ V    +LS CG+L   + GK IH  +     +    V   +I MY K
Sbjct: 546 FRSMQLSKHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGK 605

Query: 334 CGDMVSGRKVFYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVTVNTI 155
            G +   +  F     + +++WTA++  Y  N   + A+     MQ + F P+  T   +
Sbjct: 606 FGAISKAKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAV 665

Query: 154 IPVC 143
           + +C
Sbjct: 666 LSIC 669


>emb|CAN65544.1| hypothetical protein VITISV_018576 [Vitis vinifera]
          Length = 664

 Score =  211 bits (538), Expect = 4e-53
 Identities = 103/171 (60%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
 Frame = -1

Query: 511 RKMLRSKTDPNEVTFVAVLSACGQLGAFESGKWIHAYMQNNR-IQMNVHVGTALIDMYSK 335
           R M R    PN V    +L   G++GA++ G+ +HAY+   +     V + +ALIDMY K
Sbjct: 283 RWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCK 342

Query: 334 CGDMVSGRKVFYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVTVNTI 155
           CGDM SGR+VFY S+ERN VSWTALMSGY +NGRL+QALRSI WMQQE F+PDVVTV T+
Sbjct: 343 CGDMASGRQVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATV 402

Query: 154 IPVCGKLKALKQGKEIHCFAVKNGFVRQVSITTSLMMMYAKCGSHGYSVKL 2
           +PVC +L+AL+QGKEIH +AVKNGF+  VSI TSLM+MY+KCG+  YS KL
Sbjct: 403 LPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKL 453



 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/154 (38%), Positives = 87/154 (56%)
 Frame = -1

Query: 484 PNEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSKCGDMVSGRKV 305
           P+ VT   VL  C +L A   GK IH+Y   N    NV + T+L+ MYSKCG++    K+
Sbjct: 394 PDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSFKL 453

Query: 304 FYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVTVNTIIPVCGKLKAL 125
           F G   RN +SWTA++  Y  NG L +A+     MQ  + +PD V +  I+ +CG+L+ L
Sbjct: 454 FDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDSVAMARILSICGELRVL 513

Query: 124 KQGKEIHCFAVKNGFVRQVSITTSLMMMYAKCGS 23
           K GKEIH   +K  F     ++  ++ MY K G+
Sbjct: 514 KLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGA 547



 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
 Frame = -1

Query: 514 FRKMLRSKTDPNEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSK 335
           + +M     + N  +F  ++ +     AF  G   HA +  N +  +  + T+LIDMY K
Sbjct: 181 YSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRTSLIDMYFK 240

Query: 334 CGDMVSGRKVFYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVTVNTI 155
           CG +   R +F    ER+ V W A+++G+  N    +AL  + WM++E   P+ V + TI
Sbjct: 241 CGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTI 300

Query: 154 IPVCGKLKALKQGKEIHCFAVK-NGFVRQVSITTSLMMMYAKCG 26
           +PV G++ A K G+E+H + VK   + +QV I ++L+ MY KCG
Sbjct: 301 LPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCG 344



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/124 (28%), Positives = 57/124 (45%)
 Frame = -1

Query: 514 FRKMLRSKTDPNEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSK 335
           FR M  SK  P+ V    +LS CG+L   + GK IH  +     +    V   +I MY K
Sbjct: 485 FRSMQLSKHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGK 544

Query: 334 CGDMVSGRKVFYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVTVNTI 155
            G +   +  F     + +++WTA++  Y  N   + A+     MQ + F P+  T   +
Sbjct: 545 FGAISKAKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAV 604

Query: 154 IPVC 143
           + +C
Sbjct: 605 LSIC 608


>ref|XP_002888838.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334679|gb|EFH65097.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 688

 Score =  206 bits (523), Expect = 2e-51
 Identities = 104/175 (59%), Positives = 130/175 (74%), Gaps = 4/175 (2%)
 Frame = -1

Query: 514 FRKMLRSK-TDPNEVTFVAVLSACGQLGAFESGKWIHAY---MQNNRIQMNVHVGTALID 347
           FR M+  +   PN V    +L   G + A + GK +HA+   M+N   Q  VH G  LID
Sbjct: 302 FRSMISEEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKMKNYLEQPFVHSG--LID 359

Query: 346 MYSKCGDMVSGRKVFYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVT 167
           +Y KCGDMVSGR+VFYGS +RN +SWTALMSGYAANGR +QALRSIVWMQQE FKPDVVT
Sbjct: 360 LYCKCGDMVSGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFKPDVVT 419

Query: 166 VNTIIPVCGKLKALKQGKEIHCFAVKNGFVRQVSITTSLMMMYAKCGSHGYSVKL 2
           + T++PVC +L+A+KQGKEIHC+A+KN F+  VS+ TSLM+MY+KCG   Y V+L
Sbjct: 420 IATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPVRL 474



 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/153 (36%), Positives = 81/153 (52%)
 Frame = -1

Query: 484 PNEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSKCGDMVSGRKV 305
           P+ VT   VL  C +L A + GK IH Y   N    NV + T+L+ MYSKCG      ++
Sbjct: 415 PDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPVRL 474

Query: 304 FYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVTVNTIIPVCGKLKAL 125
           F    +RN  +WTA++  Y  NG L   +     M   + +PD VT+  ++ VC  LKAL
Sbjct: 475 FDRLEQRNVKAWTAMIDCYVENGDLRAGIEVFRSMLLSKHRPDSVTMGRVLTVCSDLKAL 534

Query: 124 KQGKEIHCFAVKNGFVRQVSITTSLMMMYAKCG 26
           K GKE+H   +K  F     ++  ++ MY +CG
Sbjct: 535 KLGKELHGHILKKEFESIPFVSAKIIKMYGQCG 567



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 2/157 (1%)
 Frame = -1

Query: 481 NEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSKCGDMVSGRKVF 302
           N  TF A+L+AC +  +   GK +H +++ N ++ N  + T L+ MY+ CG +   +KVF
Sbjct: 109 NATTFSALLAACVRRKSLLHGKQVHVHIRINGLESNEFIRTKLVHMYTACGSVRDAQKVF 168

Query: 301 YGSSERNTVSWTALMSGYAANG--RLEQALRSIVWMQQERFKPDVVTVNTIIPVCGKLKA 128
             S+  N  SW AL+ G   +G  R +  L +   M++     +V + + +        A
Sbjct: 169 DESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSFSNVFKSFAGASA 228

Query: 127 LKQGKEIHCFAVKNGFVRQVSITTSLMMMYAKCGSHG 17
           L+QG + H  A+KNG    V + TSL+ MY KCG  G
Sbjct: 229 LRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVG 265



 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 59/167 (35%), Positives = 89/167 (53%), Gaps = 4/167 (2%)
 Frame = -1

Query: 514 FRKMLRSKTDPNEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSK 335
           F +M     D N  +F  V  +     A   G   HA    N +  +V + T+L+DMY K
Sbjct: 201 FTEMRELGVDLNVYSFSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFK 260

Query: 334 CGDMVSGRKVFYGSSERNTVSWTALMSGYAANGRLEQAL---RSIVWMQQERFKPDVVTV 164
           CG +   R+VF    ER+ V W A+++G A N R  +AL   RS++   +E   P+ V +
Sbjct: 261 CGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRSMI--SEEGIYPNSVIL 318

Query: 163 NTIIPVCGKLKALKQGKEIHCFAVK-NGFVRQVSITTSLMMMYAKCG 26
            TI+PV G +KALK GKE+H   +K   ++ Q  + + L+ +Y KCG
Sbjct: 319 TTILPVLGDVKALKLGKEVHAHVLKMKNYLEQPFVHSGLIDLYCKCG 365



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/126 (31%), Positives = 62/126 (49%)
 Frame = -1

Query: 514 FRKMLRSKTDPNEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSK 335
           FR ML SK  P+ VT   VL+ C  L A + GK +H ++     +    V   +I MY +
Sbjct: 506 FRSMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSAKIIKMYGQ 565

Query: 334 CGDMVSGRKVFYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVTVNTI 155
           CGD+ S    F     + +++WTA++  Y  NGR   A++    M    F P+  T   I
Sbjct: 566 CGDLRSANFSFDAVVVKGSLTWTAIIEAYGYNGRFRDAIKCFEQMVSRGFTPNTFTFTAI 625

Query: 154 IPVCGK 137
           + +C +
Sbjct: 626 LSICSQ 631


>ref|NP_177302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169718|sp|Q9C9I3.1|PP115_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g71460, chloroplastic; Flags: Precursor
           gi|12323723|gb|AAG51819.1|AC016163_8 unknown protein;
           45757-47826 [Arabidopsis thaliana]
           gi|332197082|gb|AEE35203.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  202 bits (514), Expect = 2e-50
 Identities = 101/175 (57%), Positives = 129/175 (73%), Gaps = 4/175 (2%)
 Frame = -1

Query: 514 FRKML-RSKTDPNEVTFVAVLSACGQLGAFESGKWIHAYM---QNNRIQMNVHVGTALID 347
           FR M+   K  PN V    +L   G + A + GK +HA++   +N   Q  VH G  LID
Sbjct: 303 FRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSG--LID 360

Query: 346 MYSKCGDMVSGRKVFYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVT 167
           +Y KCGDM SGR+VFYGS +RN +SWTALMSGYAANGR +QALRSIVWMQQE F+PDVVT
Sbjct: 361 LYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVT 420

Query: 166 VNTIIPVCGKLKALKQGKEIHCFAVKNGFVRQVSITTSLMMMYAKCGSHGYSVKL 2
           + T++PVC +L+A+KQGKEIHC+A+KN F+  VS+ TSLM+MY+KCG   Y ++L
Sbjct: 421 IATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRL 475



 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/153 (36%), Positives = 80/153 (52%)
 Frame = -1

Query: 484 PNEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSKCGDMVSGRKV 305
           P+ VT   VL  C +L A + GK IH Y   N    NV + T+L+ MYSKCG      ++
Sbjct: 416 PDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRL 475

Query: 304 FYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVTVNTIIPVCGKLKAL 125
           F    +RN  +WTA++  Y  N  L   +     M   + +PD VT+  ++ VC  LKAL
Sbjct: 476 FDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKAL 535

Query: 124 KQGKEIHCFAVKNGFVRQVSITTSLMMMYAKCG 26
           K GKE+H   +K  F     ++  ++ MY KCG
Sbjct: 536 KLGKELHGHILKKEFESIPFVSARIIKMYGKCG 568



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 2/157 (1%)
 Frame = -1

Query: 481 NEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSKCGDMVSGRKVF 302
           N  TF A+L AC +  +   GK +H +++ N ++ N  + T L+ MY+ CG +   +KVF
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169

Query: 301 YGSSERNTVSWTALMSGYAANG--RLEQALRSIVWMQQERFKPDVVTVNTIIPVCGKLKA 128
             S+  N  SW AL+ G   +G  R +  L +   M++     +V +++ +        A
Sbjct: 170 DESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASA 229

Query: 127 LKQGKEIHCFAVKNGFVRQVSITTSLMMMYAKCGSHG 17
           L+QG + H  A+KNG    V + TSL+ MY KCG  G
Sbjct: 230 LRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVG 266



 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
 Frame = -1

Query: 514 FRKMLRSKTDPNEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSK 335
           F +M     D N  +   V  +     A   G   HA    N +  +V + T+L+DMY K
Sbjct: 202 FTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFK 261

Query: 334 CGDMVSGRKVFYGSSERNTVSWTALMSGYAANGRLEQALRSI-VWMQQERFKPDVVTVNT 158
           CG +   R+VF    ER+ V W A+++G A N R  +AL      + +E+  P+ V + T
Sbjct: 262 CGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTT 321

Query: 157 IIPVCGKLKALKQGKEIHCFAVKN-GFVRQVSITTSLMMMYAKCG 26
           I+PV G +KALK GKE+H   +K+  +V Q  + + L+ +Y KCG
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCG 366



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/126 (30%), Positives = 60/126 (47%)
 Frame = -1

Query: 514 FRKMLRSKTDPNEVTFVAVLSACGQLGAFESGKWIHAYMQNNRIQMNVHVGTALIDMYSK 335
           FR ML SK  P+ VT   VL+ C  L A + GK +H ++     +    V   +I MY K
Sbjct: 507 FRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGK 566

Query: 334 CGDMVSGRKVFYGSSERNTVSWTALMSGYAANGRLEQALRSIVWMQQERFKPDVVTVNTI 155
           CGD+ S    F   + + +++WTA++  Y  N     A+     M    F P+  T   +
Sbjct: 567 CGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAV 626

Query: 154 IPVCGK 137
           + +C +
Sbjct: 627 LSICSQ 632