BLASTX nr result

ID: Atractylodes21_contig00029568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029568
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...    69   4e-10
emb|CBI27235.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,...    55   8e-06

>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/54 (59%), Positives = 40/54 (74%)
 Frame = -1

Query: 164 SPKTPSSIQKPTSDSRSYSSWIEQLRSHTRSGNFHDAISSYIDMTTGGHRPDNF 3
           SP T  +  KPTS SRS +SW++ LRS TRS +F +AIS+YI+MT  G RPDNF
Sbjct: 40  SPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNF 93


>emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/54 (59%), Positives = 40/54 (74%)
 Frame = -1

Query: 164 SPKTPSSIQKPTSDSRSYSSWIEQLRSHTRSGNFHDAISSYIDMTTGGHRPDNF 3
           SP T  +  KPTS SRS +SW++ LRS TRS +F +AIS+YI+MT  G RPDNF
Sbjct: 40  SPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNF 93


>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 679

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = -1

Query: 137 KPTSDSRSYSSWIEQLRSHTRSGNFHDAISSYIDMTTGGHRPDNF 3
           KP S SRS +SWIE LR +TRS  F +AIS+Y+DM   G  PD++
Sbjct: 34  KPISQSRSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSY 78


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