BLASTX nr result

ID: Atractylodes21_contig00029535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029535
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271288.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...    80   2e-18
ref|XP_002518112.1| conserved hypothetical protein [Ricinus comm...    81   4e-18
ref|XP_002329914.1| predicted protein [Populus trichocarpa] gi|2...    79   2e-17
gb|ABK94153.1| unknown [Populus trichocarpa]                           79   2e-17
ref|XP_004147198.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...    78   3e-17

>ref|XP_002271288.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 8, mitochondrial isoform 1 [Vitis vinifera]
          Length = 125

 Score = 80.5 bits (197), Expect(2) = 2e-18
 Identities = 48/114 (42%), Positives = 58/114 (50%), Gaps = 29/114 (25%)
 Frame = +3

Query: 75  LSGRLSHAASQIMGGDGVVGXXXXXXXXXXXXMGLPVGKRIIP-------DQL*------ 215
           ++GRLS+ AS+IMGG GVV             MGLPVGK I+P       D+L       
Sbjct: 1   MAGRLSNVASRIMGGSGVVSRSVASSLPLRSGMGLPVGKHIVPNKPLPVNDELIWDNGTP 60

Query: 216 ----------------EARGWLCDGLGLFATLGLVAVWNDKTSKIPYTDRQQRY 329
                           EA  W+C GL  FA+LGL+AVWNDK SKIP+T R   Y
Sbjct: 61  FPEPCIDRIAETVGKYEALAWMCGGLSFFASLGLLAVWNDKASKIPFTPRVYPY 114



 Score = 37.7 bits (86), Expect(2) = 2e-18
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +2

Query: 317 TTKVYPYDNLRVDLGGEP 370
           T +VYPYDNLRV+LGGEP
Sbjct: 108 TPRVYPYDNLRVELGGEP 125


>ref|XP_002518112.1| conserved hypothetical protein [Ricinus communis]
           gi|223542708|gb|EEF44245.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score = 80.9 bits (198), Expect(2) = 4e-18
 Identities = 47/113 (41%), Positives = 56/113 (49%), Gaps = 29/113 (25%)
 Frame = +3

Query: 78  SGRLSHAASQIMGGDGVVGXXXXXXXXXXXXMGLPVGKRIIPDQ---------------- 209
           +GRLS+ AS+IMGG+GVV             MGLPVGK I+PD+                
Sbjct: 3   AGRLSNVASRIMGGNGVVSRSIGSSLRLRSGMGLPVGKHIVPDKPLPVNEELVWDNGTPF 62

Query: 210 -------------L*EARGWLCDGLGLFATLGLVAVWNDKTSKIPYTDRQQRY 329
                          EA  WLC GL  FA+LGL+AVWNDK SKIPY  +   Y
Sbjct: 63  PEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPYVPKVYPY 115



 Score = 35.8 bits (81), Expect(2) = 4e-18
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +2

Query: 323 KVYPYDNLRVDLGGEP 370
           KVYPYDNLR +LGGEP
Sbjct: 111 KVYPYDNLRAELGGEP 126


>ref|XP_002329914.1| predicted protein [Populus trichocarpa] gi|222871151|gb|EEF08282.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score = 78.6 bits (192), Expect(2) = 2e-17
 Identities = 45/114 (39%), Positives = 56/114 (49%), Gaps = 29/114 (25%)
 Frame = +3

Query: 75  LSGRLSHAASQIMGGDGVVGXXXXXXXXXXXXMGLPVGKRIIPDQ--------------- 209
           ++GRLS+ AS+IMGG+GVV             MGLPVGK I+PD+               
Sbjct: 1   MAGRLSNVASRIMGGNGVVSRSVASSLRLRSGMGLPVGKHIVPDKPISVNDELTWDNGTA 60

Query: 210 --------------L*EARGWLCDGLGLFATLGLVAVWNDKTSKIPYTDRQQRY 329
                           EA  WLC GLG FA+LGL+ VWNDK S IP+  +   Y
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGLLVVWNDKASTIPFAPKVYPY 114



 Score = 36.2 bits (82), Expect(2) = 2e-17
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +2

Query: 323 KVYPYDNLRVDLGGEP 370
           KVYPYDNL+V+LGGEP
Sbjct: 110 KVYPYDNLKVELGGEP 125


>gb|ABK94153.1| unknown [Populus trichocarpa]
          Length = 125

 Score = 78.6 bits (192), Expect(2) = 2e-17
 Identities = 45/114 (39%), Positives = 56/114 (49%), Gaps = 29/114 (25%)
 Frame = +3

Query: 75  LSGRLSHAASQIMGGDGVVGXXXXXXXXXXXXMGLPVGKRIIPDQ--------------- 209
           ++GRLS+ AS+IMGG+GVV             MGLPVGK I+PD+               
Sbjct: 1   MAGRLSNVASRIMGGNGVVSRSVASSLRLSSGMGLPVGKHIVPDKPISVNDELTWDNGTA 60

Query: 210 --------------L*EARGWLCDGLGLFATLGLVAVWNDKTSKIPYTDRQQRY 329
                           EA  WLC GLG FA+LGL+ VWNDK S IP+  +   Y
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGLLVVWNDKASTIPFAPKVYPY 114



 Score = 36.2 bits (82), Expect(2) = 2e-17
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +2

Query: 323 KVYPYDNLRVDLGGEP 370
           KVYPYDNL+V+LGGEP
Sbjct: 110 KVYPYDNLKVELGGEP 125


>ref|XP_004147198.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 8, mitochondrial-like [Cucumis sativus]
           gi|449519396|ref|XP_004166721.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
           mitochondrial-like [Cucumis sativus]
          Length = 127

 Score = 77.8 bits (190), Expect(2) = 3e-17
 Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 29/114 (25%)
 Frame = +3

Query: 75  LSGRLSHAASQIMGGDGVVGXXXXXXXXXXXXMGLPVGKRIIPDQ--------------- 209
           ++G+L++  S+I+GG+GVVG            MGLPVGK I+PD+               
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 210 --------------L*EARGWLCDGLGLFATLGLVAVWNDKTSKIPYTDRQQRY 329
                           EA  WLC GLG FA+LG +AVWNDK SKIP+  +   Y
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPY 114



 Score = 36.2 bits (82), Expect(2) = 3e-17
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +2

Query: 323 KVYPYDNLRVDLGGEP 370
           KVYPYDNLRV+LGG+P
Sbjct: 110 KVYPYDNLRVELGGDP 125


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