BLASTX nr result

ID: Atractylodes21_contig00029509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029509
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   129   2e-28
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   127   7e-28
ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [...   127   7e-28
ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   127   9e-28

>ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3739

 Score =  129 bits (324), Expect = 2e-28
 Identities = 62/67 (92%), Positives = 65/67 (97%)
 Frame = +3

Query: 3    TFARFAEKHRRLLNAFVRQNPGLLEKSLSMMLKAPRLIDFDNKRSYFRSRIRQQHDQHLT 182
            TF RFAEKHRRL NAF+RQNPGLLEKSLSMMLKAPRLIDFDNKR+YFRSRIRQQHDQHL+
Sbjct: 3315 TFTRFAEKHRRLSNAFIRQNPGLLEKSLSMMLKAPRLIDFDNKRAYFRSRIRQQHDQHLS 3374

Query: 183  GPLRISV 203
            GPLRISV
Sbjct: 3375 GPLRISV 3381


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/67 (91%), Positives = 66/67 (98%)
 Frame = +3

Query: 3    TFARFAEKHRRLLNAFVRQNPGLLEKSLSMMLKAPRLIDFDNKRSYFRSRIRQQHDQHLT 182
            TF+RFAEKHRRLLN F+RQNPGLLEKSLSMMLKAPRLIDFDNKR+YFRSRIRQQH+QHL+
Sbjct: 3304 TFSRFAEKHRRLLNTFIRQNPGLLEKSLSMMLKAPRLIDFDNKRAYFRSRIRQQHEQHLS 3363

Query: 183  GPLRISV 203
            GPLRISV
Sbjct: 3364 GPLRISV 3370


>ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3713

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/67 (91%), Positives = 64/67 (95%)
 Frame = +3

Query: 3    TFARFAEKHRRLLNAFVRQNPGLLEKSLSMMLKAPRLIDFDNKRSYFRSRIRQQHDQHLT 182
            TF RF EKHRRL NAF+RQNPGLLEKSLSMMLKAPRLIDFDNKR+YFRSRIRQQHDQHL+
Sbjct: 3289 TFTRFTEKHRRLSNAFIRQNPGLLEKSLSMMLKAPRLIDFDNKRAYFRSRIRQQHDQHLS 3348

Query: 183  GPLRISV 203
            GPLRISV
Sbjct: 3349 GPLRISV 3355


>ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223538012|gb|EEF39625.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3691

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/67 (91%), Positives = 65/67 (97%)
 Frame = +3

Query: 3    TFARFAEKHRRLLNAFVRQNPGLLEKSLSMMLKAPRLIDFDNKRSYFRSRIRQQHDQHLT 182
            TFARFAEKHRRLLN F+RQNP LLEKSLSM+LKAPRLIDFDNKRSYFRSRIRQQH+QHL+
Sbjct: 3267 TFARFAEKHRRLLNTFIRQNPSLLEKSLSMLLKAPRLIDFDNKRSYFRSRIRQQHEQHLS 3326

Query: 183  GPLRISV 203
            GPLRISV
Sbjct: 3327 GPLRISV 3333


>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/67 (89%), Positives = 66/67 (98%)
 Frame = +3

Query: 3    TFARFAEKHRRLLNAFVRQNPGLLEKSLSMMLKAPRLIDFDNKRSYFRSRIRQQHDQHLT 182
            TF RFAEKHRRLLNAF+RQNPGLLEKSLS++LKAPRLIDFDNKR+YFRSRIRQQH+QHL+
Sbjct: 3692 TFVRFAEKHRRLLNAFIRQNPGLLEKSLSLVLKAPRLIDFDNKRAYFRSRIRQQHEQHLS 3751

Query: 183  GPLRISV 203
            GPLRISV
Sbjct: 3752 GPLRISV 3758


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