BLASTX nr result
ID: Atractylodes21_contig00028979
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00028979
(299 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
ref|XP_002511573.1| pentatricopeptide repeat-containing protein,... 99 5e-19
ref|NP_177599.1| pentatricopeptide repeat-containing protein [Ar... 98 8e-19
ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arab... 95 7e-18
ref|NP_172104.1| pentatricopeptide repeat-containing protein [Ar... 83 2e-14
>ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product
[Vitis vinifera]
Length = 893
Score = 114 bits (284), Expect = 1e-23
Identities = 57/99 (57%), Positives = 72/99 (72%)
Frame = +1
Query: 1 HGCAYCAIELFREMLLHDVILDETTLTAVLAACSSLGSLKIGKEIHGFFIRRQDRKVVFG 180
H A A++LFREMLL ++ D+ TLTA L ACS+L SL+ GKE+HG+ +R + K V
Sbjct: 527 HDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLV 586
Query: 181 GSLIVNMYSRCGALKLARRAFSMMPSIDQVSCSSLVSGY 297
G +VNMYS+CGA+ LARR F M+P DQ SCSSLVSGY
Sbjct: 587 GGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGY 625
Score = 56.2 bits (134), Expect = 3e-06
Identities = 27/95 (28%), Positives = 58/95 (61%)
Frame = +1
Query: 13 YCAIELFREMLLHDVILDETTLTAVLAACSSLGSLKIGKEIHGFFIRRQDRKVVFGGSLI 192
+ A++LF +M + + T +++L AC++L L+ G+ + G+ I+ + VF G+ I
Sbjct: 230 WVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAI 289
Query: 193 VNMYSRCGALKLARRAFSMMPSIDQVSCSSLVSGY 297
+++Y++C + A + F MP + VS ++++SG+
Sbjct: 290 IDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGF 324
Score = 56.2 bits (134), Expect = 3e-06
Identities = 28/93 (30%), Positives = 52/93 (55%)
Frame = +1
Query: 19 AIELFREMLLHDVILDETTLTAVLAACSSLGSLKIGKEIHGFFIRRQDRKVVFGGSLIVN 198
A+ LF E+ + D+ +D T+++V+ A + L SL IG ++H + V GS +V
Sbjct: 634 ALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVT 693
Query: 199 MYSRCGALKLARRAFSMMPSIDQVSCSSLVSGY 297
MYS+CG++ + F + D +S ++++ Y
Sbjct: 694 MYSKCGSIDECHKVFEQIEKPDLISWTAMIVSY 726
>ref|XP_002511573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550688|gb|EEF52175.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 954
Score = 98.6 bits (244), Expect = 5e-19
Identities = 52/99 (52%), Positives = 67/99 (67%)
Frame = +1
Query: 1 HGCAYCAIELFREMLLHDVILDETTLTAVLAACSSLGSLKIGKEIHGFFIRRQDRKVVFG 180
HG AY A EL R+ML D+TT +A+L+A SS+ SL+ GKEIHG+ R +
Sbjct: 530 HGHAYQAFELLRKMLTERSKPDQTTFSAILSAASSIHSLQKGKEIHGYAYRARLGDEALV 589
Query: 181 GSLIVNMYSRCGALKLARRAFSMMPSIDQVSCSSLVSGY 297
G +VNMYS+CGAL+ AR+ F ++ DQVSCSSLVSGY
Sbjct: 590 GGALVNMYSKCGALESARKMFDLLAVKDQVSCSSLVSGY 628
Score = 65.5 bits (158), Expect = 4e-09
Identities = 35/95 (36%), Positives = 62/95 (65%)
Frame = +1
Query: 13 YCAIELFREMLLHDVILDETTLTAVLAACSSLGSLKIGKEIHGFFIRRQDRKVVFGGSLI 192
+ A+++F +M V+ + T +++L AC+SL +++GK I G+ I+ K +F G+ I
Sbjct: 234 WIALDIFYQMSRRFVVPNSFTFSSILTACASLEEVELGKGIQGWVIKCC-AKDIFVGTAI 292
Query: 193 VNMYSRCGALKLARRAFSMMPSIDQVSCSSLVSGY 297
VNMY++CG + A + FS MP + VS +++VSG+
Sbjct: 293 VNMYAKCGDIVDAVKEFSRMPVRNVVSWTAIVSGF 327
Score = 54.7 bits (130), Expect = 8e-06
Identities = 26/91 (28%), Positives = 53/91 (58%)
Frame = +1
Query: 19 AIELFREMLLHDVILDETTLTAVLAACSSLGSLKIGKEIHGFFIRRQDRKVVFGGSLIVN 198
A+ LF EML+ + +D +++VL A + L L G ++H ++ V GS +V
Sbjct: 637 ALLLFHEMLISNFTIDSFAVSSVLGAIAGLNRLDFGTQLHAHLVKLGLDSDVSVGSSLVT 696
Query: 199 MYSRCGALKLARRAFSMMPSIDQVSCSSLVS 291
+YS+CG+++ +AF+ + D +S +++++
Sbjct: 697 VYSKCGSIEDCWKAFNQIDDADLISWTTMIA 727
>ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical
protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 97.8 bits (242), Expect = 8e-19
Identities = 52/93 (55%), Positives = 64/93 (68%)
Frame = +1
Query: 19 AIELFREMLLHDVILDETTLTAVLAACSSLGSLKIGKEIHGFFIRRQDRKVVFGGSLIVN 198
AI LF EML DE+TL AVL CSS SL GKEIHG+ +R K + GS +VN
Sbjct: 535 AIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVN 594
Query: 199 MYSRCGALKLARRAFSMMPSIDQVSCSSLVSGY 297
MYS+CG+LKLAR+ + +P +D VSCSSL+SGY
Sbjct: 595 MYSKCGSLKLARQVYDRLPELDPVSCSSLISGY 627
>ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata] gi|297334827|gb|EFH65245.1| hypothetical protein
ARALYDRAFT_476599 [Arabidopsis lyrata subsp. lyrata]
Length = 717
Score = 94.7 bits (234), Expect = 7e-18
Identities = 50/93 (53%), Positives = 63/93 (67%)
Frame = +1
Query: 19 AIELFREMLLHDVILDETTLTAVLAACSSLGSLKIGKEIHGFFIRRQDRKVVFGGSLIVN 198
AI LF EML DE+TL AVL CSSL SL KEIHG+ +R + + GS +VN
Sbjct: 357 AIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVN 416
Query: 199 MYSRCGALKLARRAFSMMPSIDQVSCSSLVSGY 297
YS+CG+LKLAR+ + +P +D VSCSSL+SGY
Sbjct: 417 TYSKCGSLKLARKVYDRLPEMDPVSCSSLISGY 449
>ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity
to a hypothetical protein F24K9.13 gi|6006885 from
Arabidopsis thaliana gb|AC008153 and contains multiple
PPR PF|01535 repeats [Arabidopsis thaliana]
gi|332189825|gb|AEE27946.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 558
Score = 83.2 bits (204), Expect = 2e-14
Identities = 37/93 (39%), Positives = 61/93 (65%)
Frame = +1
Query: 19 AIELFREMLLHDVILDETTLTAVLAACSSLGSLKIGKEIHGFFIRRQDRKVVFGGSLIVN 198
A +LFR+ML ++ ++ TL A+L +CSSLGSL+ GK +HG+ IR + ++
Sbjct: 296 AFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFID 355
Query: 199 MYSRCGALKLARRAFSMMPSIDQVSCSSLVSGY 297
MY+RCG +++AR F MMP + +S SS+++ +
Sbjct: 356 MYARCGNIQMARTVFDMMPERNVISWSSMINAF 388