BLASTX nr result

ID: Atractylodes21_contig00028978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028978
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subuni...   445   e-123
emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]   445   e-123
ref|XP_002881822.1| hypothetical protein ARALYDRAFT_483299 [Arab...   442   e-122
ref|XP_002530707.1| DNA polymerase delta small subunit, putative...   441   e-121
ref|NP_181742.2| DNA polymerase delta subunit 2 [Arabidopsis tha...   438   e-121

>ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
           gi|297739835|emb|CBI30017.3| unnamed protein product
           [Vitis vinifera]
          Length = 439

 Score =  445 bits (1144), Expect = e-123
 Identities = 218/298 (73%), Positives = 246/298 (82%)
 Frame = +1

Query: 1   FEIQKEMYKGQQYSQIYYIRLHLIRTLIYSLLPNWKPHLPVCTVLGLEEGKECIIVGTLY 180
           F I+KE Y+GQQYSQIY+ RLH++RTLIYSL+PNWKPHLPVCTVLGLEEGKECIIVGTLY
Sbjct: 23  FRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPHLPVCTVLGLEEGKECIIVGTLY 82

Query: 181 KHMKLKPTILSEYSKERSATPLVSPDNFVHPDDTLVLEDESGRVNLKGSVLSPSVYVTGN 360
           KHMKLKP IL EYSKERS  PLV P NF+H DD+LVLEDESGRV L G++L PSVYVTG 
Sbjct: 83  KHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLEDESGRVKLGGTMLLPSVYVTGT 142

Query: 361 VVALHGKETSRGDFLVEDILEAGLPPQLDLPNESGEDKYXXXXXXXXXXXXXXXXXXXXX 540
           VV LHGKETS G+FLV+DIL+A LPPQ++LP +S EDKY                     
Sbjct: 143 VVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDKYVVFVSGLSVGSSTSNPLQFQL 202

Query: 541 XVDHITGHLGDEKEQHSAAQIVQVVVAGNSVQIHHELLNGQNLASKDQSRLSEPIKELDI 720
            VDHITGHLGDEKEQ  AAQIV VV+AGNSV +   LLNGQNLASKDQSRLSEPIKELDI
Sbjct: 203 LVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRGLLNGQNLASKDQSRLSEPIKELDI 262

Query: 721 FLTQIAAGLPIDIMAGYNDPANFALPQQPLNRCLFPGSAAYNTFRSCTNPHLFDVDNV 894
            LTQIAAGLP+DIM G +DPANF+LPQQPL+RCLFPGS+AYN+FRSCTNPH F+++N+
Sbjct: 263 LLTQIAAGLPLDIMPGPDDPANFSLPQQPLHRCLFPGSSAYNSFRSCTNPHSFELENI 320


>emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
          Length = 439

 Score =  445 bits (1144), Expect = e-123
 Identities = 219/298 (73%), Positives = 247/298 (82%)
 Frame = +1

Query: 1   FEIQKEMYKGQQYSQIYYIRLHLIRTLIYSLLPNWKPHLPVCTVLGLEEGKECIIVGTLY 180
           F I+KE Y+GQQYSQIY+ RLH++RTLIYSL+PNWKPHLPVCTVLGLEEGKECIIVGTLY
Sbjct: 23  FRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPHLPVCTVLGLEEGKECIIVGTLY 82

Query: 181 KHMKLKPTILSEYSKERSATPLVSPDNFVHPDDTLVLEDESGRVNLKGSVLSPSVYVTGN 360
           KHMKLKP IL EYSKERS  PLV P NF+H DD+LVLEDESGRV L G++L PSVYVTG 
Sbjct: 83  KHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLEDESGRVKLGGTMLLPSVYVTGT 142

Query: 361 VVALHGKETSRGDFLVEDILEAGLPPQLDLPNESGEDKYXXXXXXXXXXXXXXXXXXXXX 540
           VV LHGKETS G+FLV+DIL+A LPPQ++LP +S EDKY                     
Sbjct: 143 VVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDKYVVFVSGLSVGSSXSNPLQFQL 202

Query: 541 XVDHITGHLGDEKEQHSAAQIVQVVVAGNSVQIHHELLNGQNLASKDQSRLSEPIKELDI 720
            VDHITGHLGDEKEQ  AAQIV VV+AGNSV +   LLNGQNLASKDQSRLSEPIKELDI
Sbjct: 203 LVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRGLLNGQNLASKDQSRLSEPIKELDI 262

Query: 721 FLTQIAAGLPIDIMAGYNDPANFALPQQPLNRCLFPGSAAYNTFRSCTNPHLFDVDNV 894
            LTQIAAGLP+DIM G +DPANF+LPQQPL+RCLFPGS+AYN+FRSCTNPH F+++N+
Sbjct: 263 LLTQIAAGLPLDIMPGPDDPANFSLPQQPLHRCLFPGSSAYNSFRSCTNPHSFELENI 320


>ref|XP_002881822.1| hypothetical protein ARALYDRAFT_483299 [Arabidopsis lyrata subsp.
           lyrata] gi|297327661|gb|EFH58081.1| hypothetical protein
           ARALYDRAFT_483299 [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score =  442 bits (1136), Expect = e-122
 Identities = 212/298 (71%), Positives = 242/298 (81%)
 Frame = +1

Query: 1   FEIQKEMYKGQQYSQIYYIRLHLIRTLIYSLLPNWKPHLPVCTVLGLEEGKECIIVGTLY 180
           FEIQKEMY+GQQYSQIY++RLHL+RTL+YSL P WKPHLPVC VLGLE+GKEC+IVGTL+
Sbjct: 24  FEIQKEMYRGQQYSQIYFVRLHLMRTLLYSLAPTWKPHLPVCKVLGLEKGKECVIVGTLF 83

Query: 181 KHMKLKPTILSEYSKERSATPLVSPDNFVHPDDTLVLEDESGRVNLKGSVLSPSVYVTGN 360
           KHMKLKP +L EYSKERS TPLV P NF+HPDD L+LEDESGRV L GS LSP++YVTG 
Sbjct: 84  KHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILEDESGRVKLAGSALSPAIYVTGV 143

Query: 361 VVALHGKETSRGDFLVEDILEAGLPPQLDLPNESGEDKYXXXXXXXXXXXXXXXXXXXXX 540
           VVALHGKET+ G+F VED+LEAGLPPQ++ P +  +DKY                     
Sbjct: 144 VVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQDDKYVVLLSGLCIGSKSAIPLQFQL 203

Query: 541 XVDHITGHLGDEKEQHSAAQIVQVVVAGNSVQIHHELLNGQNLASKDQSRLSEPIKELDI 720
            VDHITGHLGDE+EQ  AAQIV VV+AGNSV+   +L+NGQNLASKDQS L EPIKELDI
Sbjct: 204 LVDHITGHLGDEEEQGLAAQIVHVVIAGNSVEFPRKLINGQNLASKDQSTLYEPIKELDI 263

Query: 721 FLTQIAAGLPIDIMAGYNDPANFALPQQPLNRCLFPGSAAYNTFRSCTNPHLFDVDNV 894
            L QIAAG+ +DIM G NDPANFALPQQPLNRCLFPGS+ YNTFRSCTNPH FD+DN+
Sbjct: 264 MLNQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPGSSPYNTFRSCTNPHSFDLDNI 321


>ref|XP_002530707.1| DNA polymerase delta small subunit, putative [Ricinus communis]
           gi|223529721|gb|EEF31661.1| DNA polymerase delta small
           subunit, putative [Ricinus communis]
          Length = 425

 Score =  441 bits (1134), Expect = e-121
 Identities = 217/298 (72%), Positives = 244/298 (81%)
 Frame = +1

Query: 1   FEIQKEMYKGQQYSQIYYIRLHLIRTLIYSLLPNWKPHLPVCTVLGLEEGKECIIVGTLY 180
           +EIQ E Y+GQQYSQIY+ RLH+IRTL+YSL+P WK HLPVCTVLGL EGKECIIVGTLY
Sbjct: 23  YEIQNETYRGQQYSQIYFARLHMIRTLLYSLVPLWKSHLPVCTVLGLVEGKECIIVGTLY 82

Query: 181 KHMKLKPTILSEYSKERSATPLVSPDNFVHPDDTLVLEDESGRVNLKGSVLSPSVYVTGN 360
           KHMKLKP IL EYSKERSA PLV P NF+H DD LVLEDESGRV L G +L+PS YVTG 
Sbjct: 83  KHMKLKPCILDEYSKERSAIPLVKPHNFMHLDDHLVLEDESGRVKLGGDMLTPSAYVTGL 142

Query: 361 VVALHGKETSRGDFLVEDILEAGLPPQLDLPNESGEDKYXXXXXXXXXXXXXXXXXXXXX 540
           VVALHGKET  GDF+V D+LEAGLPPQ++LP +S EDKY                     
Sbjct: 143 VVALHGKETGAGDFMVLDVLEAGLPPQIELPLQSREDKYVVFVSGLNVGSSTFNPLQFQL 202

Query: 541 XVDHITGHLGDEKEQHSAAQIVQVVVAGNSVQIHHELLNGQNLASKDQSRLSEPIKELDI 720
            VDHITGHLG+EKEQ  AA+IV VV+AGNSV+I H LLNGQNLASKDQSRLSEP+KELDI
Sbjct: 203 LVDHITGHLGNEKEQAIAAEIVHVVIAGNSVEIPHGLLNGQNLASKDQSRLSEPVKELDI 262

Query: 721 FLTQIAAGLPIDIMAGYNDPANFALPQQPLNRCLFPGSAAYNTFRSCTNPHLFDVDNV 894
           FL+QIAA +P+DIM G NDPANF+LPQQPL+RCLFPGSAAYNTFRSCTNPH F++DN+
Sbjct: 263 FLSQIAASMPMDIMPGSNDPANFSLPQQPLHRCLFPGSAAYNTFRSCTNPHCFELDNI 320


>ref|NP_181742.2| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
           gi|330254979|gb|AEC10073.1| DNA polymerase delta subunit
           2 [Arabidopsis thaliana]
          Length = 441

 Score =  438 bits (1127), Expect = e-121
 Identities = 213/298 (71%), Positives = 240/298 (80%)
 Frame = +1

Query: 1   FEIQKEMYKGQQYSQIYYIRLHLIRTLIYSLLPNWKPHLPVCTVLGLEEGKECIIVGTLY 180
           FEIQKEMY+GQQYSQIY+ RLHL+RTL+YSL P WK HLPVC VLGLE+GKECIIVGTL+
Sbjct: 24  FEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKSHLPVCKVLGLEKGKECIIVGTLF 83

Query: 181 KHMKLKPTILSEYSKERSATPLVSPDNFVHPDDTLVLEDESGRVNLKGSVLSPSVYVTGN 360
           KHMKLKP +L EYSKERS TPLV P NF+HPDD L+LEDESGRV L GS LSP++YVTG 
Sbjct: 84  KHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILEDESGRVKLAGSALSPAIYVTGV 143

Query: 361 VVALHGKETSRGDFLVEDILEAGLPPQLDLPNESGEDKYXXXXXXXXXXXXXXXXXXXXX 540
           VVALHGKET+ G+F VED+LEAGLPPQ++ P +  EDKY                     
Sbjct: 144 VVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQEDKYVVLLSGLCIGSKSANPLQFQL 203

Query: 541 XVDHITGHLGDEKEQHSAAQIVQVVVAGNSVQIHHELLNGQNLASKDQSRLSEPIKELDI 720
            VDHITGHLGDE+EQ  AAQIV VV+AGNS +   +L+NGQNLASKDQS L EPIKELDI
Sbjct: 204 LVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKLINGQNLASKDQSTLYEPIKELDI 263

Query: 721 FLTQIAAGLPIDIMAGYNDPANFALPQQPLNRCLFPGSAAYNTFRSCTNPHLFDVDNV 894
            L+QIAAG+ +DIM G NDPANFALPQQPLNRCLFPGS+ YNTFRSCTNPH FDVDN+
Sbjct: 264 MLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPGSSPYNTFRSCTNPHSFDVDNI 321


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