BLASTX nr result

ID: Atractylodes21_contig00028948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028948
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634611.1| PREDICTED: TMV resistance protein N-like, pa...    61   1e-07
ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vi...    60   2e-07
emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera]    60   2e-07
ref|XP_002522604.1| leucine-rich repeat containing protein, puta...    59   5e-07
ref|XP_002329461.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>ref|XP_003634611.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 824

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/76 (47%), Positives = 46/76 (60%)
 Frame = -3

Query: 234 PQNLHAFSCLEELHLSGNSQLTQLPAGISDLSRLKLLELNMCCRLQNLHALPSGIQVLRA 55
           P +L + S LE L+L  NS +T LPA +S LSRLK L L  C  L++L  LPS I+ L A
Sbjct: 521 PTDLSSLSSLENLYLDKNSFIT-LPASLSRLSRLKRLTLEHCKSLRSLPELPSSIEYLNA 579

Query: 54  RGCSSLEKIGDLSQEY 7
             C+SLE +   S  Y
Sbjct: 580 HSCASLETLSCSSSTY 595


>ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1092

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/76 (46%), Positives = 46/76 (60%)
 Frame = -3

Query: 234  PQNLHAFSCLEELHLSGNSQLTQLPAGISDLSRLKLLELNMCCRLQNLHALPSGIQVLRA 55
            P +L + S LE L+L  NS +T LPA +S LSRL+ L L  C  L++L  LPS I+ L A
Sbjct: 797  PSDLSSLSSLENLYLDKNSFIT-LPASLSRLSRLRSLTLEHCKSLRSLPELPSSIEYLNA 855

Query: 54   RGCSSLEKIGDLSQEY 7
              C+SLE +   S  Y
Sbjct: 856  HSCTSLETLSCSSSTY 871


>emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera]
          Length = 1177

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/76 (46%), Positives = 46/76 (60%)
 Frame = -3

Query: 234  PQNLHAFSCLEELHLSGNSQLTQLPAGISDLSRLKLLELNMCCRLQNLHALPSGIQVLRA 55
            P +L + S LE L+L  NS +T LPA +S LSRL+ L L  C  L++L  LPS I+ L A
Sbjct: 882  PSDLSSLSSLENLYLDKNSFIT-LPASLSRLSRLRSLTLEHCKSLRSLPELPSSIEYLNA 940

Query: 54   RGCSSLEKIGDLSQEY 7
              C+SLE +   S  Y
Sbjct: 941  HSCTSLETLSCSSSTY 956


>ref|XP_002522604.1| leucine-rich repeat containing protein, putative [Ricinus communis]
            gi|223538080|gb|EEF39691.1| leucine-rich repeat
            containing protein, putative [Ricinus communis]
          Length = 1158

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/77 (44%), Positives = 46/77 (59%)
 Frame = -3

Query: 234  PQNLHAFSCLEELHLSGNSQLTQLPAGISDLSRLKLLELNMCCRLQNLHALPSGIQVLRA 55
            P +L   S + EL+LSG S    +PAGI+ LS+L+ + +  C RLQ+L  LP  I+ L A
Sbjct: 855  PADLKYLSSIVELNLSG-SNFDTMPAGINQLSKLRWINVTGCKRLQSLPELPPRIRYLNA 913

Query: 54   RGCSSLEKIGDLSQEYE 4
            R C SL  I  L Q +E
Sbjct: 914  RDCRSLVSISGLKQLFE 930


>ref|XP_002329461.1| predicted protein [Populus trichocarpa] gi|222870141|gb|EEF07272.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/73 (45%), Positives = 45/73 (61%)
 Frame = -3

Query: 234 PQNLHAFSCLEELHLSGNSQLTQLPAGISDLSRLKLLELNMCCRLQNLHALPSGIQVLRA 55
           P++L +   L +L L  NS    LPAG+S L RLK L L+   RLQ + ALP  + VL A
Sbjct: 241 PRDLGSLPSLTKLELDRNS-FQSLPAGLSSLLRLKSLRLDDNTRLQTIPALPRNLDVLHA 299

Query: 54  RGCSSLEKIGDLS 16
             C+SLE++ D+S
Sbjct: 300 LNCTSLERLSDIS 312


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