BLASTX nr result

ID: Atractylodes21_contig00028941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028941
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07

>ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
           [Vitis vinifera]
          Length = 575

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
 Frame = +3

Query: 51  KTRSELKNYLQTDTQL---IRKASDFCHRINQPNLSSNLYSSIRIHLSNGAPKEALLIYA 221
           K ++E +N+      L   +++ SDFC     P+LS N    IR +LS GAP+EALL+Y 
Sbjct: 26  KPQNERQNHQTQSPSLPKSLKQGSDFCPGKGTPSLS-NWCHLIRSYLSQGAPREALLVYT 84

Query: 222 QNRRNLLCMLRVVPLVFKARASLSMI 299
             RR  + +L V PLV KA ASLS++
Sbjct: 85  GLRRKGVYLLGVAPLVLKACASLSIV 110


Top