BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028940
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containi...   105   3e-21
ref|XP_003527965.1| PREDICTED: pentatricopeptide repeat-containi...    92   3e-17
ref|NP_188784.3| pentatricopeptide repeat-containing protein [Ar...    87   1e-15
ref|XP_002883307.1| hypothetical protein ARALYDRAFT_318888 [Arab...    84   1e-14
ref|XP_003602124.1| Pentatricopeptide repeat-containing protein ...    80   2e-13

>ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
           [Vitis vinifera]
          Length = 575

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/93 (58%), Positives = 66/93 (70%)
 Frame = -1

Query: 281 GTTKEALLIYA*NRRNPICILIVVPLVFKACASLSMINFGKALHSESTKAGVQSDVVVGT 102
           G  +EALL+Y   RR  + +L V PLV KACASLS++  GKALH+ES K GV  DV++GT
Sbjct: 74  GAPREALLVYTGLRRKGVYLLGVAPLVLKACASLSIVKHGKALHAESIKNGVDFDVMIGT 133

Query: 101 SIVNMYGKCNEVFDARKVFDEMLVKNVVTLNAM 3
           S+V MY KC  V D+RKVFD M  +N VT NAM
Sbjct: 134 SLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAM 166


>ref|XP_003527965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g21470-like [Glycine max]
          Length = 535

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/93 (50%), Positives = 63/93 (67%)
 Frame = -1

Query: 281 GTTKEALLIYA*NRRNPICILIVVPLVFKACASLSMINFGKALHSESTKAGVQSDVVVGT 102
           G+ + ALL Y   R   +    V PL+FKACASL  +++ KALH+ES KAG +SDV++GT
Sbjct: 26  GSLRCALLAYKQTRHEGVYDSSVAPLLFKACASLPFLHYVKALHAESIKAGSESDVIIGT 85

Query: 101 SIVNMYGKCNEVFDARKVFDEMLVKNVVTLNAM 3
           +++  Y KC  V DAR +FD M  +NVVT NAM
Sbjct: 86  ALLTTYSKCGVVRDARNLFDTMPERNVVTWNAM 118


>ref|NP_188784.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274363|sp|Q9LVF9.1|PP245_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g21470 gi|11994382|dbj|BAB02341.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332642992|gb|AEE76513.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 48/94 (51%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
 Frame = -1

Query: 281 GTTKEALLIYA*NRRNPICILIVVPLVFKACASL-SMINFGKALHSESTKAGVQSDVVVG 105
           G+  +AL++Y   RR  +     VPL+ +ACA +   +  GK LHSES K GV SDV+VG
Sbjct: 25  GSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVG 84

Query: 104 TSIVNMYGKCNEVFDARKVFDEMLVKNVVTLNAM 3
           +S+++MYGKC  V  ARKVFDEM  +NV T NAM
Sbjct: 85  SSLISMYGKCGCVVSARKVFDEMPERNVATWNAM 118


>ref|XP_002883307.1| hypothetical protein ARALYDRAFT_318888 [Arabidopsis lyrata subsp.
           lyrata] gi|297329147|gb|EFH59566.1| hypothetical protein
           ARALYDRAFT_318888 [Arabidopsis lyrata subsp. lyrata]
          Length = 523

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = -1

Query: 281 GTTKEALLIYA*NRRNPICILIVVPLVFKACASL-SMINFGKALHSESTKAGVQSDVVVG 105
           G+  +AL++Y   RR  +     VPL+ KACA +   +  GK LHSES K GV SDV+VG
Sbjct: 25  GSPIQALVLYGGIRRRGVYFPGWVPLILKACACVVPRVVLGKLLHSESIKFGVCSDVMVG 84

Query: 104 TSIVNMYGKCNEVFDARKVFDEMLVKNVVTLNAM 3
           +S+++MYGK   V  ARKVFDEM  +NV T NAM
Sbjct: 85  SSLISMYGKWGCVVSARKVFDEMPERNVATWNAM 118


>ref|XP_003602124.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491172|gb|AES72375.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 616

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/90 (48%), Positives = 56/90 (62%)
 Frame = -1

Query: 272 KEALLIYA*NRRNPICILIVVPLVFKACASLSMINFGKALHSESTKAGVQSDVVVGTSIV 93
           K AL++Y   R +      V+P + KAC S   + + K+LH+ES KAG   DV +GT+IV
Sbjct: 34  KRALVLYKQTRHDTTHDPTVIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIV 93

Query: 92  NMYGKCNEVFDARKVFDEMLVKNVVTLNAM 3
             Y KC  V DARKVFD M  +NVVT NAM
Sbjct: 94  AAYAKCGVVCDARKVFDLMPERNVVTWNAM 123