BLASTX nr result

ID: Atractylodes21_contig00028926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028926
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332426.1| predicted protein [Populus trichocarpa] gi|2...    76   7e-12
ref|XP_002309291.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
ref|XP_002300413.1| glutamate-gated kainate-type ion channel rec...    73   6e-11
ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07
ref|XP_002318476.1| predicted protein [Populus trichocarpa] gi|2...    61   3e-07

>ref|XP_002332426.1| predicted protein [Populus trichocarpa] gi|222832379|gb|EEE70856.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score = 76.3 bits (186), Expect = 7e-12
 Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
 Frame = -3

Query: 361 VFSVSSLRRMHEDKLLSTSRYSGEFAWCKLVPHKINIFMWILQR*GILVREVLYDRGI-N 185
           V++VSS   + +  ++S++ +S    W    P KI++F+W+L    +  ++ L  R I N
Sbjct: 131 VYTVSSGCHLLDGLIVSSNLHSPALLWKGFAPPKIDVFIWLLLNGSVCTKDFLAKRRIIN 190

Query: 184 VESRLCPMCGNYIESITHCFVECYHSFSLWRAIFNWWGRVISDSISFDELINIPSWNGL 8
            E  LCP C   IE+I H F  C  S+SLW  +F W+GRV    +  D   N+  W+GL
Sbjct: 191 YEDALCPFCCKEIETIHHLFHLCPTSWSLWGRLFRWFGRV--GCLPKDPNHNLQEWSGL 247


>ref|XP_002309291.1| predicted protein [Populus trichocarpa] gi|222855267|gb|EEE92814.1|
            predicted protein [Populus trichocarpa]
          Length = 1285

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
 Frame = -3

Query: 361  VFSVSSLRRMHEDKLLSTSRYSGEFAWCKLVPHKINIFMWILQR*GILVREVLYDRGI-N 185
            V++VSS   + +  ++ST+ +S    W    P KI++F+W+L    +  ++ L  R I N
Sbjct: 1091 VYTVSSGCHLLDGLIVSTNLHSPALLWKGFAPPKIDVFIWLLLNGSVCTKDFLAKRRIIN 1150

Query: 184  VESRLCPMCGNYIESITHCFVECYHSFSLWRAIFNWWGRVISDSISFDELINIPSWNGL 8
             E  LCP C   IE+I H F  C  S+SLW  +F W+G V    +  D   N+  W+GL
Sbjct: 1151 YEDALCPFCCKEIETIHHLFHLCPTSWSLWGRLFRWFGCV--GCLPKDPNHNLQEWSGL 1207


>ref|XP_002300413.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222847671|gb|EEE85218.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 1005

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
 Frame = -3

Query: 361  VFSVSSLRRMHEDKLLSTSRYSGEFAWCKLVPHKINIFMWILQR*GILVREVLYDRGI-N 185
            V++VSS   + +  ++ST+ +S    W    P KI++F+W+L    +  +  L  R I N
Sbjct: 853  VYTVSSGCHLLDGLIVSTNLHSPVLLWKGFAPPKIDVFIWLLLNGSVCTKYFLAKRRIIN 912

Query: 184  VESRLCPMCGNYIESITHCFVECYHSFSLWRAIFNWWGRVISDSISFDELINIPSWNGL 8
             E  LCP C   IE+I H F  C  S+SLW  +F+W+G V    +  D   N+  W+GL
Sbjct: 913  YEEALCPFCCKEIETIHHLFHLCPTSWSLWGRLFSWFGCV--GCLPKDPNHNLQEWSGL 969


>ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|222854148|gb|EEE91695.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
 Frame = -3

Query: 364 GVFSVSSLRRMHEDKLLSTSRYSGEFAWCKLVPHKINIFMWILQR*GILVREVLYDRGI- 188
           G FS+ SL  +   K    + +S    W  +VP K+ +F W+     I  R +L  RGI 
Sbjct: 319 GRFSIKSLCGLLSPKPPMDTSFSFTGIWRGIVPPKVEVFCWMAIIKKINTRSMLVRRGIL 378

Query: 187 NVESRLCPMCGNYIESITHCFVECYHSFSLWRAIFNWWG 71
           ++ +  CP+C    ES+ H  + C+  + +W  I NWWG
Sbjct: 379 DISAAACPICLAEEESVDHILLHCHKHWIVWSKIINWWG 417


>ref|XP_002318476.1| predicted protein [Populus trichocarpa] gi|222859149|gb|EEE96696.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
 Frame = -3

Query: 361 VFSVSSLRRMHEDKLLSTSRYSGEFAWCKLVPHKINIFMWILQR*GILVREVLYDRGI-N 185
           V++VSS   + +  ++ST+ +S    W    P KI++F+W+L    +  ++ L  R I N
Sbjct: 31  VYTVSSGCHLLDGLIVSTNLHSPALLWKGFSPSKIDVFIWLLLNGSVCTKDFLAKRRIIN 90

Query: 184 VESRLCPMCGNYIESITHCFVECYHSFSLW 95
            E  LCP C   IE+I H F  C  S+SLW
Sbjct: 91  YEEALCPFCCKEIETIHHLFHLCPTSWSLW 120


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