BLASTX nr result

ID: Atractylodes21_contig00028868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028868
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    79   3e-13
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    76   3e-12
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    74   1e-11
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    64   1e-08
ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854...    59   4e-07

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/71 (52%), Positives = 48/71 (67%)
 Frame = -3

Query: 214 AVKKVKLPEFLGFDPQGWITKAELYFDIHATPPHLRIRLAQLSMGGAAQHWFTIVKEVYP 35
           A KKVKLP F G DP  WIT+AE+YFD+  T   +R++LA+LSM G+  HWF ++ E   
Sbjct: 70  AGKKVKLPLFDGDDPVAWITRAEIYFDVQDTSDDMRVKLARLSMEGSTIHWFNLLMETED 129

Query: 34  DLSWEVFTREL 2
           +LSWE   R L
Sbjct: 130 ELSWENLKRAL 140


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355502480|gb|AES83683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 36/71 (50%), Positives = 47/71 (66%)
 Frame = -3

Query: 214 AVKKVKLPEFLGFDPQGWITKAELYFDIHATPPHLRIRLAQLSMGGAAQHWFTIVKEVYP 35
           A KKVKLP F G DP  WIT+AE+YFD+  TP  +R++L++LSM G   HWF ++ E   
Sbjct: 743 AGKKVKLPLFEGDDPVAWITRAEIYFDVQNTPDDMRVKLSRLSMEGPTIHWFNLLMETED 802

Query: 34  DLSWEVFTREL 2
           DLS E   + L
Sbjct: 803 DLSREKLKKAL 813


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/69 (49%), Positives = 45/69 (65%)
 Frame = -3

Query: 208 KKVKLPEFLGFDPQGWITKAELYFDIHATPPHLRIRLAQLSMGGAAQHWFTIVKEVYPDL 29
           KKVKLP F G D   WIT+ E+YFD+  T   +R++LA+LSM G+  HWF ++ E   +L
Sbjct: 55  KKVKLPLFEGDDLVAWITRVEIYFDVQNTTDKMRVKLARLSMEGSTIHWFNLLMETEDEL 114

Query: 28  SWEVFTREL 2
           SWE   R L
Sbjct: 115 SWEKLKRAL 123


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/65 (46%), Positives = 42/65 (64%)
 Frame = -3

Query: 214 AVKKVKLPEFLGFDPQGWITKAELYFDIHATPPHLRIRLAQLSMGGAAQHWFTIVKEVYP 35
           +VKKV+L  F G DP GWI +AE+YF++  T P +++ LAQL M G   H+F  + E   
Sbjct: 80  SVKKVELLMFNGDDPAGWIARAEVYFNVQNTTPEIKVNLAQLCMDGPTIHFFKGLLEENE 139

Query: 34  DLSWE 20
            L+WE
Sbjct: 140 TLTWE 144


>ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
          Length = 2807

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/68 (38%), Positives = 38/68 (55%)
 Frame = -3

Query: 205 KVKLPEFLGFDPQGWITKAELYFDIHATPPHLRIRLAQLSMGGAAQHWFTIVKEVYPDLS 26
           K+++P+F G DP GW+ + E +FD H TP  LR+R+    M G A  W+  +K      S
Sbjct: 259 KMEIPKFNGTDPHGWVFRVEEFFDFHGTPEPLRLRIVSFHMEGPAAGWYQWMKANNLLSS 318

Query: 25  WEVFTREL 2
           W+ F   L
Sbjct: 319 WKAFLLSL 326


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