BLASTX nr result

ID: Atractylodes21_contig00028852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028852
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36786.1| MYBR domain class transcription factor [Malus x d...    91   1e-16
gb|AFP93565.1| MYB [Cestrum nocturnum]                                 89   4e-16
ref|XP_004133848.1| PREDICTED: transcription factor ASG4-like [C...    87   1e-15
ref|XP_002874991.1| predicted protein [Arabidopsis lyrata subsp....    85   5e-15
gb|AAF81310.1|AC061957_6 Contains similarity to a dehydrogenase ...    85   7e-15

>gb|ADL36786.1| MYBR domain class transcription factor [Malus x domestica]
          Length = 350

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 51/99 (51%), Positives = 58/99 (58%), Gaps = 17/99 (17%)
 Frame = +3

Query: 27  PAQDLYRLGVVNTSMGFDSL--LPAPVST---------------DNSVAAVNFSNSLLDD 155
           P Q  Y    +NT+MG   L  +P P  T                 S AA N ++   DD
Sbjct: 8   PPQGFYLFDPMNTNMGLPGLSSMPPPPPTAAASATAATSTTAACTASSAAANAASMSADD 67

Query: 156 TSKKIRKPYTITKSRQNWTDIEHDKFLEALHLFDRDWKK 272
            SKKIRKPYTITKSR++WTD EHDKFLEAL LFDRDWKK
Sbjct: 68  QSKKIRKPYTITKSRESWTDQEHDKFLEALQLFDRDWKK 106


>gb|AFP93565.1| MYB [Cestrum nocturnum]
          Length = 324

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/86 (54%), Positives = 56/86 (65%)
 Frame = +3

Query: 15  PKQPPAQDLYRLGVVNTSMGFDSLLPAPVSTDNSVAAVNFSNSLLDDTSKKIRKPYTITK 194
           P  PP+QD Y +G   T MG        +S D++   V     + DD SKK RKPYTITK
Sbjct: 6   PTPPPSQDFYYMGDP-TKMGLPGTNGDALSLDSNTGLV-----IPDDHSKKTRKPYTITK 59

Query: 195 SRQNWTDIEHDKFLEALHLFDRDWKK 272
           SR++WT+ EHDKFLEAL LFDRDWKK
Sbjct: 60  SRESWTEQEHDKFLEALQLFDRDWKK 85


>ref|XP_004133848.1| PREDICTED: transcription factor ASG4-like [Cucumis sativus]
          Length = 316

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/59 (72%), Positives = 47/59 (79%)
 Frame = +3

Query: 96  PVSTDNSVAAVNFSNSLLDDTSKKIRKPYTITKSRQNWTDIEHDKFLEALHLFDRDWKK 272
           P ST NSVAA   S    +D SKKIRKPYTITKSR++WT+ EHDKFLEAL LFDRDWKK
Sbjct: 26  PTSTSNSVAAFPVS----EDASKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKK 80


>ref|XP_002874991.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320828|gb|EFH51250.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 305

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/73 (60%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
 Frame = +3

Query: 57  VNTSM-GFDSLLPAPVSTDNSVAAVNFSNSLLDDTSKKIRKPYTITKSRQNWTDIEHDKF 233
           VN S+ G D     P++T  +   V+FS    +D + KIRKPYTI KSR+NWTD EHDKF
Sbjct: 17  VNMSLPGSDGFGSNPIATIPATGRVSFS----EDPTTKIRKPYTIKKSRENWTDQEHDKF 72

Query: 234 LEALHLFDRDWKK 272
           LEALHLFDRDWKK
Sbjct: 73  LEALHLFDRDWKK 85


>gb|AAF81310.1|AC061957_6 Contains similarity to a dehydrogenase from Arabidopsis thaliana
            gb|Y12776 and contains a D-isomer specific 2-hydroxyacid
            dehydrogenases PF|00389 and Myb-like DNA binding PF|00249
            domains. ESTs gb|Z48385, gb|Z48386 come from this gene
            [Arabidopsis thaliana]
          Length = 1284

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/67 (59%), Positives = 51/67 (76%)
 Frame = +3

Query: 72   GFDSLLPAPVSTDNSVAAVNFSNSLLDDTSKKIRKPYTITKSRQNWTDIEHDKFLEALHL 251
            GF++L     +   S+ + N + S  +D +KK+RKPYTITKSR+NWT+ EHDKFLEALHL
Sbjct: 1017 GFNTLPHTATTIPVSIRS-NRTMSFFEDPTKKVRKPYTITKSRENWTEQEHDKFLEALHL 1075

Query: 252  FDRDWKK 272
            FDRDWKK
Sbjct: 1076 FDRDWKK 1082


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