BLASTX nr result

ID: Atractylodes21_contig00028848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028848
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated...   137   7e-31
ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated...   132   4e-29
ref|XP_003610454.1| U3 small nucleolar RNA-associated protein-li...   127   7e-28
ref|XP_003610453.1| U3 small nucleolar RNA-associated protein-li...   127   7e-28
ref|XP_002518458.1| hepatocellular carcinoma-associated antigen,...   127   1e-27

>ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Vitis vinifera] gi|302144122|emb|CBI23227.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score =  137 bits (346), Expect = 7e-31
 Identities = 69/100 (69%), Positives = 82/100 (82%)
 Frame = -3

Query: 308 RNGIQSARDMYKRFLALPRPGLAFYRNCIEMELNLASSTGAKAHLVEAQKLYEAALSMYD 129
           ++GIQSAR+MYKRFLALPRPGL  Y+ CIE+ELNLA+    K  LV A+KL+E+AL+ YD
Sbjct: 549 KDGIQSAREMYKRFLALPRPGLPMYKICIELELNLAAIND-KDCLVNARKLFESALTTYD 607

Query: 128 QDASLWQDYHSMESKMGTSETAAAVHWRARKTLKGNVTLL 9
           QD +LWQDY+SME KMGTSETAAAVHWRARK LK    L+
Sbjct: 608 QDINLWQDYYSMEIKMGTSETAAAVHWRARKKLKDAAALI 647


>ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 655

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/94 (67%), Positives = 78/94 (82%)
 Frame = -3

Query: 308 RNGIQSARDMYKRFLALPRPGLAFYRNCIEMELNLASSTGAKAHLVEAQKLYEAALSMYD 129
           ++GIQ  RD+YKRFLALPRPGLA YR+CI++E NLAS  G K  L+ A+KLYE+AL+ YD
Sbjct: 552 KDGIQKTRDIYKRFLALPRPGLALYRHCIDLETNLAS-IGDKDGLINARKLYESALATYD 610

Query: 128 QDASLWQDYHSMESKMGTSETAAAVHWRARKTLK 27
           Q+ SLWQDY+ ME+KMGTSE A A++WRARK LK
Sbjct: 611 QNVSLWQDYYRMETKMGTSEKANAIYWRARKVLK 644


>ref|XP_003610454.1| U3 small nucleolar RNA-associated protein-like protein [Medicago
           truncatula] gi|355511509|gb|AES92651.1| U3 small
           nucleolar RNA-associated protein-like protein [Medicago
           truncatula]
          Length = 665

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/94 (65%), Positives = 74/94 (78%)
 Frame = -3

Query: 308 RNGIQSARDMYKRFLALPRPGLAFYRNCIEMELNLASSTGAKAHLVEAQKLYEAALSMYD 129
           ++GI  ARD+YKR+LALP PGLA YR CIE+E NLAS TG K  LV A+KLYE+AL+ YD
Sbjct: 561 KDGIHKARDIYKRYLALPHPGLALYRKCIELEANLAS-TGDKNSLVNARKLYESALATYD 619

Query: 128 QDASLWQDYHSMESKMGTSETAAAVHWRARKTLK 27
           Q+   WQDY+ ME KMGTS+ A AV+WRARK LK
Sbjct: 620 QNVDFWQDYYRMEVKMGTSQQATAVYWRARKILK 653


>ref|XP_003610453.1| U3 small nucleolar RNA-associated protein-like protein [Medicago
           truncatula] gi|355511508|gb|AES92650.1| U3 small
           nucleolar RNA-associated protein-like protein [Medicago
           truncatula]
          Length = 647

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/94 (65%), Positives = 74/94 (78%)
 Frame = -3

Query: 308 RNGIQSARDMYKRFLALPRPGLAFYRNCIEMELNLASSTGAKAHLVEAQKLYEAALSMYD 129
           ++GI  ARD+YKR+LALP PGLA YR CIE+E NLAS TG K  LV A+KLYE+AL+ YD
Sbjct: 543 KDGIHKARDIYKRYLALPHPGLALYRKCIELEANLAS-TGDKNSLVNARKLYESALATYD 601

Query: 128 QDASLWQDYHSMESKMGTSETAAAVHWRARKTLK 27
           Q+   WQDY+ ME KMGTS+ A AV+WRARK LK
Sbjct: 602 QNVDFWQDYYRMEVKMGTSQQATAVYWRARKILK 635


>ref|XP_002518458.1| hepatocellular carcinoma-associated antigen, putative [Ricinus
           communis] gi|223542303|gb|EEF43845.1| hepatocellular
           carcinoma-associated antigen, putative [Ricinus
           communis]
          Length = 652

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/100 (64%), Positives = 79/100 (79%)
 Frame = -3

Query: 308 RNGIQSARDMYKRFLALPRPGLAFYRNCIEMELNLASSTGAKAHLVEAQKLYEAALSMYD 129
           +NGIQ AR+ YKRFLALPRPGLA  R CIE+E NLAS    K  L  A+KLYE+AL+ +D
Sbjct: 548 KNGIQFARETYKRFLALPRPGLALLRTCIELEENLASIHD-KECLGNARKLYESALATHD 606

Query: 128 QDASLWQDYHSMESKMGTSETAAAVHWRARKTLKGNVTLL 9
           Q+  LW+DYH+ME K+GTSETA AV+WRARKTLK + +L+
Sbjct: 607 QNVRLWRDYHAMEIKLGTSETANAVYWRARKTLKNSASLI 646


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