BLASTX nr result

ID: Atractylodes21_contig00028833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028833
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|2...   317   1e-84
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi...   310   1e-82
emb|CBI38165.3| unnamed protein product [Vitis vinifera]              308   6e-82
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...   308   6e-82
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ...   304   9e-81

>ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|222853423|gb|EEE90970.1|
            predicted protein [Populus trichocarpa]
          Length = 710

 Score =  317 bits (811), Expect = 1e-84
 Identities = 148/203 (72%), Positives = 174/203 (85%)
 Frame = +3

Query: 3    LFKEMLASGEKPDHVTMIGLLSACSHAGLVEEGRHHFYSMSKEYGIEPMTDHYACMVDLL 182
            LF++ML SGEKPDHVTMIG L ACSHAGLVEEGR +F+SM+KE+G+ P+ DHY CMVDLL
Sbjct: 484  LFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLL 543

Query: 183  GRAGCLDEAKDLIETMPIQPDAVVWASLLGACKVHRNIELGKYVAEKLIEIDSNNSGPYV 362
            GRAGCL+EAKDLIE+MP QPDAVVW+SLL ACKVHRNI LGKYVAEK+ EID  +SGPYV
Sbjct: 544  GRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYV 603

Query: 363  LLSNMYAEQGNWGDVKRVRKLMKQRGVIKQPGCSWIEVEGKVHVFMVKDRRQPQKKEIYM 542
            LL+NMY+E G WGD   VRKLM++RGV+KQPGCSWI+++  VHVFMVKD+R PQKKEIY 
Sbjct: 604  LLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYS 663

Query: 543  LLRTLSKVMNLFGYVPNAHDLEA 611
            +L+ L+K M   GYVP+A D EA
Sbjct: 664  ILKLLTKHMRQAGYVPDASDHEA 686


>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like
            [Glycine max]
          Length = 705

 Score =  310 bits (795), Expect = 1e-82
 Identities = 147/202 (72%), Positives = 171/202 (84%)
 Frame = +3

Query: 3    LFKEMLASGEKPDHVTMIGLLSACSHAGLVEEGRHHFYSMSKEYGIEPMTDHYACMVDLL 182
            +F++ML SG+KPDHVTMIG+LSACSHAGLVEEGR +F+SM  E G+ PM DH+ CMVDLL
Sbjct: 479  IFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLL 538

Query: 183  GRAGCLDEAKDLIETMPIQPDAVVWASLLGACKVHRNIELGKYVAEKLIEIDSNNSGPYV 362
            GRAGCLDEA DLI+TMP+QPD VVW SLL ACKVH NIELGKYVAEKL+EID  NSGPYV
Sbjct: 539  GRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYV 598

Query: 363  LLSNMYAEQGNWGDVKRVRKLMKQRGVIKQPGCSWIEVEGKVHVFMVKDRRQPQKKEIYM 542
            LLSNMYAE G W DV RVRK M+QRGVIKQPGCSWIE++ +VHVFMVKD+R P KK+I++
Sbjct: 599  LLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHL 658

Query: 543  LLRTLSKVMNLFGYVPNAHDLE 608
            +L+ L++ M   GYVP A D E
Sbjct: 659  VLKFLTEQMKWAGYVPEADDDE 680


>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  308 bits (788), Expect = 6e-82
 Identities = 143/203 (70%), Positives = 173/203 (85%)
 Frame = +3

Query: 3    LFKEMLASGEKPDHVTMIGLLSACSHAGLVEEGRHHFYSMSKEYGIEPMTDHYACMVDLL 182
            +F++ML  GEKPDHVTMIG+L ACSHAGLVEEGRH+F+SM +E+G+ P+ DHY CMVDLL
Sbjct: 445  IFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLL 503

Query: 183  GRAGCLDEAKDLIETMPIQPDAVVWASLLGACKVHRNIELGKYVAEKLIEIDSNNSGPYV 362
            GRAGCL+EAK+LIE MP+ PDAVVW SLL ACKVH NIE+GK+ AEKL+EID  NSGPYV
Sbjct: 504  GRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYV 563

Query: 363  LLSNMYAEQGNWGDVKRVRKLMKQRGVIKQPGCSWIEVEGKVHVFMVKDRRQPQKKEIYM 542
            LLSNMYAE G WGDV RVRKLM+Q+GV KQPGCSWIEVE +VHVF+VKD+  P +K+IY 
Sbjct: 564  LLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYS 623

Query: 543  LLRTLSKVMNLFGYVPNAHDLEA 611
            +L+ L++ M   GY+P+A+D EA
Sbjct: 624  VLKMLTEQMKRVGYIPDANDFEA 646


>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
            [Vitis vinifera]
          Length = 684

 Score =  308 bits (788), Expect = 6e-82
 Identities = 143/203 (70%), Positives = 173/203 (85%)
 Frame = +3

Query: 3    LFKEMLASGEKPDHVTMIGLLSACSHAGLVEEGRHHFYSMSKEYGIEPMTDHYACMVDLL 182
            +F++ML  GEKPDHVTMIG+L ACSHAGLVEEGRH+F+SM +E+G+ P+ DHY CMVDLL
Sbjct: 475  IFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLL 533

Query: 183  GRAGCLDEAKDLIETMPIQPDAVVWASLLGACKVHRNIELGKYVAEKLIEIDSNNSGPYV 362
            GRAGCL+EAK+LIE MP+ PDAVVW SLL ACKVH NIE+GK+ AEKL+EID  NSGPYV
Sbjct: 534  GRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYV 593

Query: 363  LLSNMYAEQGNWGDVKRVRKLMKQRGVIKQPGCSWIEVEGKVHVFMVKDRRQPQKKEIYM 542
            LLSNMYAE G WGDV RVRKLM+Q+GV KQPGCSWIEVE +VHVF+VKD+  P +K+IY 
Sbjct: 594  LLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYS 653

Query: 543  LLRTLSKVMNLFGYVPNAHDLEA 611
            +L+ L++ M   GY+P+A+D EA
Sbjct: 654  VLKMLTEQMKRVGYIPDANDFEA 676


>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355491679|gb|AES72882.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  304 bits (778), Expect = 9e-81
 Identities = 143/202 (70%), Positives = 169/202 (83%)
 Frame = +3

Query: 3    LFKEMLASGEKPDHVTMIGLLSACSHAGLVEEGRHHFYSMSKEYGIEPMTDHYACMVDLL 182
            +F+EML SGE+PDHVTMIG+LSACSHAGLVEEGR +F SM+ E+G+ P+ DHY CMVDLL
Sbjct: 479  IFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLL 538

Query: 183  GRAGCLDEAKDLIETMPIQPDAVVWASLLGACKVHRNIELGKYVAEKLIEIDSNNSGPYV 362
            GRAGCLDEA +LI+TMP++PDAVVW SLL ACKVH NI LGKYVAE+L+EID  NSGPYV
Sbjct: 539  GRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYV 598

Query: 363  LLSNMYAEQGNWGDVKRVRKLMKQRGVIKQPGCSWIEVEGKVHVFMVKDRRQPQKKEIYM 542
            LLSNMYAE G W DV RVRK M+Q GVIKQPGCSWI ++  +HVFMVKD+R P KK+IY+
Sbjct: 599  LLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYL 658

Query: 543  LLRTLSKVMNLFGYVPNAHDLE 608
            +L+ L++ M   GYVP A D E
Sbjct: 659  ILKILTEQMKRVGYVPEADDDE 680


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