BLASTX nr result

ID: Atractylodes21_contig00028730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028730
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|2...    70   9e-10
gb|AAG11426.1|AC015449_8 Hypothetical protein [Arabidopsis thali...    64   6e-08
ref|NP_175168.1| F-box associated ubiquitination effector family...    64   6e-08
ref|XP_002528721.1| conserved hypothetical protein [Ricinus comm...    63   1e-07

>ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|222839713|gb|EEE78036.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = -2

Query: 501 YATEFYQLIARNDIQKSEE*LVSRYIGGLKVQIMDSVNLFDPISLYEAHQQALAFEKQ-N 325
           Y TEFYQL++R+ I + EE  V RYIG L++Q  D +N+FD +S+ +AHQ+A+  EKQ  
Sbjct: 195 YTTEFYQLVSRDAIAEDEESRVVRYIGRLRIQFQDVLNMFDVLSVSDAHQRAVQLEKQLV 254

Query: 324 RRMCGSYSTANTGGNYGTSS 265
           RR  G  +   +G N   +S
Sbjct: 255 RRNTGGLNFGGSGANTSNNS 274


>gb|AAG11426.1|AC015449_8 Hypothetical protein [Arabidopsis thaliana]
          Length = 532

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 39/92 (42%), Positives = 55/92 (59%)
 Frame = -2

Query: 501 YATEFYQLIARNDIQKSEE*LVSRYIGGLKVQIMDSVNLFDPISLYEAHQQALAFEKQNR 322
           YA EFY L+  NDI  S+  LVSR IG L+ Q+ +S++ FDP ++ EAH++A +FEKQ R
Sbjct: 18  YAEEFYLLLTFNDINDSQTQLVSRLIGELRSQLQNSLSQFDPTTVSEAHRRAASFEKQMR 77

Query: 321 RMCGSYSTANTGGNYGTSSFVPRAGPNQSRPT 226
               S++  NT          PR+   Q+ PT
Sbjct: 78  --SASWNFTNTR---------PRSLEQQTPPT 98


>ref|NP_175168.1| F-box associated ubiquitination effector family protein
           [Arabidopsis thaliana] gi|332194038|gb|AEE32159.1| F-box
           associated ubiquitination effector family protein
           [Arabidopsis thaliana]
          Length = 528

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 39/92 (42%), Positives = 55/92 (59%)
 Frame = -2

Query: 501 YATEFYQLIARNDIQKSEE*LVSRYIGGLKVQIMDSVNLFDPISLYEAHQQALAFEKQNR 322
           YA EFY L+  NDI  S+  LVSR IG L+ Q+ +S++ FDP ++ EAH++A +FEKQ R
Sbjct: 18  YAEEFYLLLTFNDINDSQTQLVSRLIGELRSQLQNSLSQFDPTTVSEAHRRAASFEKQMR 77

Query: 321 RMCGSYSTANTGGNYGTSSFVPRAGPNQSRPT 226
               S++  NT          PR+   Q+ PT
Sbjct: 78  --SASWNFTNTR---------PRSLEQQTPPT 98


>ref|XP_002528721.1| conserved hypothetical protein [Ricinus communis]
           gi|223531815|gb|EEF33633.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 92

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 38/97 (39%), Positives = 58/97 (59%)
 Frame = -2

Query: 501 YATEFYQLIARNDIQKSEE*LVSRYIGGLKVQIMDSVNLFDPISLYEAHQQALAFEKQNR 322
           Y T+FYQLIARN+IQ++E+ L             D+VNLFDP+S+  AHQ+AL  E+Q+R
Sbjct: 7   YTTKFYQLIARNEIQETEDQL-------------DTVNLFDPVSVSAAHQRALVVERQSR 53

Query: 321 RMCGSYSTANTGGNYGTSSFVPRAGPNQSRPTGNNLG 211
           R+    +  N+ G  G S+ V  +  N++  + +  G
Sbjct: 54  RV----ANLNSWGG-GNSAIVNNSSVNKTASSNSGSG 85


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