BLASTX nr result

ID: Atractylodes21_contig00028715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028715
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21823.1| unknown [Picea sitchensis] gi|116790489|gb|ABK256...   118   4e-25
ref|XP_002273533.1| PREDICTED: mitochondral 37S ribosomal protei...   118   4e-25
ref|XP_004161956.1| PREDICTED: mitochondral 37S ribosomal protei...   117   1e-24
ref|XP_004145134.1| PREDICTED: mitochondral 37S ribosomal protei...   117   1e-24
ref|XP_002865330.1| hypothetical protein ARALYDRAFT_494514 [Arab...   114   8e-24

>gb|ABK21823.1| unknown [Picea sitchensis] gi|116790489|gb|ABK25632.1| unknown
           [Picea sitchensis]
          Length = 99

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/78 (70%), Positives = 67/78 (85%)
 Frame = -1

Query: 405 MSLRSMLAQAAVRGVTEARAKIFGHVLNPTGQRSAHKILRKKFIGEKVASWYPKDILKED 226
           MSL+ +L +AA++GVTEARA+IFGHVLNPTGQRS HKILRKK IGE+VA WYP DI K+D
Sbjct: 1   MSLKQLLKEAALKGVTEARARIFGHVLNPTGQRSPHKILRKKLIGEQVAQWYPDDICKDD 60

Query: 225 PLVVARKEHVRLSKLEML 172
           P+++AR E  RL KL+ML
Sbjct: 61  PMLIARSEKERLEKLQML 78


>ref|XP_002273533.1| PREDICTED: mitochondral 37S ribosomal protein S27 [Vitis vinifera]
           gi|297738035|emb|CBI27236.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/81 (71%), Positives = 67/81 (82%)
 Frame = -1

Query: 414 IEKMSLRSMLAQAAVRGVTEARAKIFGHVLNPTGQRSAHKILRKKFIGEKVASWYPKDIL 235
           +  + L+S+L+ A   GVTEARA+IFGHVLNPTGQRS HKILRKK IGEKVA WYP DI 
Sbjct: 1   MSSLGLKSLLSAAVKGGVTEARARIFGHVLNPTGQRSPHKILRKKLIGEKVAQWYPYDIK 60

Query: 234 KEDPLVVARKEHVRLSKLEML 172
           K+DPLV+AR+E  RLSKLEML
Sbjct: 61  KDDPLVMARQEQERLSKLEML 81


>ref|XP_004161956.1| PREDICTED: mitochondral 37S ribosomal protein S27-like [Cucumis
           sativus]
          Length = 141

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/77 (72%), Positives = 66/77 (85%)
 Frame = -1

Query: 402 SLRSMLAQAAVRGVTEARAKIFGHVLNPTGQRSAHKILRKKFIGEKVASWYPKDILKEDP 223
           SL+SM+A A  +GVTEARA+IFGH+LNPTGQRS HK+LRKK IG+KV+ WYP DI K+DP
Sbjct: 44  SLKSMIAAAVNKGVTEARARIFGHILNPTGQRSTHKLLRKKLIGDKVSQWYPYDIKKDDP 103

Query: 222 LVVARKEHVRLSKLEML 172
           LV+AR E  RLSKLEML
Sbjct: 104 LVMARLEQERLSKLEML 120


>ref|XP_004145134.1| PREDICTED: mitochondral 37S ribosomal protein S27-like isoform 1
           [Cucumis sativus] gi|449454786|ref|XP_004145135.1|
           PREDICTED: mitochondral 37S ribosomal protein S27-like
           isoform 2 [Cucumis sativus]
           gi|449454788|ref|XP_004145136.1| PREDICTED: mitochondral
           37S ribosomal protein S27-like isoform 3 [Cucumis
           sativus]
          Length = 102

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/77 (72%), Positives = 66/77 (85%)
 Frame = -1

Query: 402 SLRSMLAQAAVRGVTEARAKIFGHVLNPTGQRSAHKILRKKFIGEKVASWYPKDILKEDP 223
           SL+SM+A A  +GVTEARA+IFGH+LNPTGQRS HK+LRKK IG+KV+ WYP DI K+DP
Sbjct: 5   SLKSMIAAAVNKGVTEARARIFGHILNPTGQRSTHKLLRKKLIGDKVSQWYPYDIKKDDP 64

Query: 222 LVVARKEHVRLSKLEML 172
           LV+AR E  RLSKLEML
Sbjct: 65  LVMARLEQERLSKLEML 81


>ref|XP_002865330.1| hypothetical protein ARALYDRAFT_494514 [Arabidopsis lyrata subsp.
           lyrata] gi|297311165|gb|EFH41589.1| hypothetical protein
           ARALYDRAFT_494514 [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/77 (71%), Positives = 65/77 (84%)
 Frame = -1

Query: 402 SLRSMLAQAAVRGVTEARAKIFGHVLNPTGQRSAHKILRKKFIGEKVASWYPKDILKEDP 223
           SL+S+++ A  RGVTEARA+IFGH+LNPTGQRS HKILRKK IG+KVA WYP DI  EDP
Sbjct: 5   SLKSLISSAVGRGVTEARARIFGHMLNPTGQRSPHKILRKKLIGDKVAEWYPYDIKNEDP 64

Query: 222 LVVARKEHVRLSKLEML 172
            V+AR+E  R+SKLEML
Sbjct: 65  NVLAREEQERISKLEML 81


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