BLASTX nr result

ID: Atractylodes21_contig00028685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028685
         (1253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...   526   e-147
ref|XP_002511689.1| DNA repair and recombination protein radA, p...   516   e-144
ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog ...   499   e-139
ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medic...   489   e-136
ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medic...   489   e-136

>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
            gi|296089196|emb|CBI38899.3| unnamed protein product
            [Vitis vinifera]
          Length = 346

 Score =  526 bits (1356), Expect = e-147
 Identities = 266/346 (76%), Positives = 305/346 (88%)
 Frame = +2

Query: 104  MEVLRLPLSASQKGRLISAGYTSIASLSSVSPSQLALELKISEAEVLEILKSVSDGSRLE 283
            ME+ RLP+SASQ+G+LISAGYTS++SLSS+SPS LA +LKIS+ E LEIL+ VS GSRL+
Sbjct: 1    MELARLPISASQRGKLISAGYTSLSSLSSLSPSTLAQDLKISDNEALEILRVVSQGSRLD 60

Query: 284  STSSSCTIVNGAQSAWDMLQEEETLVRITTSCADLDNILGGGISCKEVTEIGGVPGIGKT 463
                S  IVNGAQ+AWDML EEE+L  ITTSC DLD+ILGGGI CKEVTEIGGVPGIGKT
Sbjct: 61   KPDGSHAIVNGAQTAWDMLHEEESLKCITTSCVDLDDILGGGIKCKEVTEIGGVPGIGKT 120

Query: 464  QLGIQLAVNVQIPFDYGGLGGKAIYIDTEGSFMVERALQIAEACGDDMVEYSHLHRKGPQ 643
            QLGIQLAVNVQIP +YGGLGGKAIYIDTEGSFM+ER+LQIAEAC +DM   S   +K  Q
Sbjct: 121  QLGIQLAVNVQIPVNYGGLGGKAIYIDTEGSFMLERSLQIAEACIEDMSGNSDFLQKDFQ 180

Query: 644  AWEVKMQPKDFLENIFYFRVCSYTEQIALINYLEKFITEHKDVKVVIIDSITFHFRQDFE 823
            + +VK QPKDFL+NIFYFRVCSYTEQIA+INYL+KFI+EHKDV VVIIDS+TFHFRQDF+
Sbjct: 181  SCQVKAQPKDFLQNIFYFRVCSYTEQIAMINYLDKFISEHKDVNVVIIDSVTFHFRQDFD 240

Query: 824  DMALRTRVLSGMALKLMKLARKFGVAVVLLNQVTTKYSDGSFHLALALGDSWSHASTNRI 1003
            D+ALRTR+LSGMALKLMKLA+KF +AVVLLNQVTTK+++GSF L LALGDSWSH+ TNR+
Sbjct: 241  DLALRTRLLSGMALKLMKLAKKFSLAVVLLNQVTTKHTEGSFQLTLALGDSWSHSCTNRV 300

Query: 1004 ILHWNGNERYAYIDKSPSLRSASAPYSVTAKGIRNSASNNKRIKNM 1141
            IL+WNG+ERYAYIDKSPSLRSASAPYSVT KGIR + S  KRIK M
Sbjct: 301  ILYWNGDERYAYIDKSPSLRSASAPYSVTGKGIRTATSKCKRIKIM 346


>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
            communis] gi|223548869|gb|EEF50358.1| DNA repair and
            recombination protein radA, putative [Ricinus communis]
          Length = 346

 Score =  516 bits (1329), Expect = e-144
 Identities = 259/346 (74%), Positives = 300/346 (86%)
 Frame = +2

Query: 104  MEVLRLPLSASQKGRLISAGYTSIASLSSVSPSQLALELKISEAEVLEILKSVSDGSRLE 283
            MEV RLPLSASQ+G+LI AGYTS++SLSSVSPS LA +LKIS++E LEILK  S  SRL+
Sbjct: 1    MEVSRLPLSASQRGKLILAGYTSLSSLSSVSPSDLARDLKISDSEALEILKVASRNSRLD 60

Query: 284  STSSSCTIVNGAQSAWDMLQEEETLVRITTSCADLDNILGGGISCKEVTEIGGVPGIGKT 463
                   ++NGAQ+AW+ML EE +L RITTSCADLDNILGGGI+CKEVTEIGG+PGIGKT
Sbjct: 61   GMEGCHAVINGAQNAWEMLHEESSLTRITTSCADLDNILGGGITCKEVTEIGGLPGIGKT 120

Query: 464  QLGIQLAVNVQIPFDYGGLGGKAIYIDTEGSFMVERALQIAEACGDDMVEYSHLHRKGPQ 643
            QLGIQLAVNVQIP   GGLGGKA+YIDTEGSFMVER LQ+AEA  +DM+EYS   R+  Q
Sbjct: 121  QLGIQLAVNVQIPPYCGGLGGKAVYIDTEGSFMVERVLQVAEASVEDMLEYSRFLRRDLQ 180

Query: 644  AWEVKMQPKDFLENIFYFRVCSYTEQIALINYLEKFITEHKDVKVVIIDSITFHFRQDFE 823
              +V  Q KD LENI+YFRVCSYTEQ+AL+NYLEKFI+EH+DVKVVIIDSITFHFRQDF+
Sbjct: 181  TCQVATQSKDILENIYYFRVCSYTEQVALVNYLEKFISEHRDVKVVIIDSITFHFRQDFD 240

Query: 824  DMALRTRVLSGMALKLMKLARKFGVAVVLLNQVTTKYSDGSFHLALALGDSWSHASTNRI 1003
            D+ALRTRVLSGMALKLMK+A+ F +AVVLLNQVTTK+++GSF L LALG+SWSH+ TNRI
Sbjct: 241  DLALRTRVLSGMALKLMKIAKSFSLAVVLLNQVTTKHTEGSFQLGLALGESWSHSCTNRI 300

Query: 1004 ILHWNGNERYAYIDKSPSLRSASAPYSVTAKGIRNSASNNKRIKNM 1141
            IL+WN NERYAYIDKSPSL+SA+APYSVT  GIRNS+SN KR+K M
Sbjct: 301  ILYWNSNERYAYIDKSPSLKSATAPYSVTRGGIRNSSSNCKRVKMM 346


>ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Cucumis sativus]
            gi|449480051|ref|XP_004155785.1| PREDICTED: DNA repair
            protein RAD51 homolog 3-like [Cucumis sativus]
          Length = 346

 Score =  499 bits (1285), Expect = e-139
 Identities = 247/346 (71%), Positives = 299/346 (86%)
 Frame = +2

Query: 104  MEVLRLPLSASQKGRLISAGYTSIASLSSVSPSQLALELKISEAEVLEILKSVSDGSRLE 283
            MEV RLP+SA+ +G+LIS+GYT+++SL+SVSPS LA EL+IS  E  ++LK  S G  L+
Sbjct: 1    MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 284  STSSSCTIVNGAQSAWDMLQEEETLVRITTSCADLDNILGGGISCKEVTEIGGVPGIGKT 463
             +  S  IVNGA++AWDML +E+ + RITTSCADLDN+LGGGI+  EVTEIGGVPGIGKT
Sbjct: 61   RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 464  QLGIQLAVNVQIPFDYGGLGGKAIYIDTEGSFMVERALQIAEACGDDMVEYSHLHRKGPQ 643
            QLGIQLAVNVQIP  +GG+GGKA+YIDTEGSFMVERALQIAEAC +DM +YS L +K   
Sbjct: 121  QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 644  AWEVKMQPKDFLENIFYFRVCSYTEQIALINYLEKFITEHKDVKVVIIDSITFHFRQDFE 823
              +++++PKD LENIFYFRVCSYTEQIALINYL+KFITEHKDVKVVI+DS+TFHFRQ+F+
Sbjct: 181  PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 824  DMALRTRVLSGMALKLMKLARKFGVAVVLLNQVTTKYSDGSFHLALALGDSWSHASTNRI 1003
            D+ALRTR+LS MALK MKLA+KF +AVVL NQVTTK+++GSF L LALGDSWSH+ TNRI
Sbjct: 241  DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 1004 ILHWNGNERYAYIDKSPSLRSASAPYSVTAKGIRNSASNNKRIKNM 1141
            IL+WNG+ERYAY++KSPSL+SASAPYSVT +GIRN  S+NKR K M
Sbjct: 301  ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 346


>ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medicago truncatula]
            gi|355506214|gb|AES87356.1| DNA repair protein RAD51-like
            protein [Medicago truncatula]
          Length = 347

 Score =  489 bits (1260), Expect = e-136
 Identities = 241/345 (69%), Positives = 293/345 (84%), Gaps = 1/345 (0%)
 Frame = +2

Query: 104  MEVLRLPLSASQKGRLISAGYTSIASLSSVSPSQLALELKISEAEVLEILKSVSDGSRLE 283
            ME+  LP+SAS++G+L++AGYT++ S+   S + LA ++++SE+E LEIL   +  S L+
Sbjct: 1    MEIGMLPISASKRGKLLAAGYTTLHSILRTSTTHLARDIEVSESEALEILNFATRSSDLD 60

Query: 284  STS-SSCTIVNGAQSAWDMLQEEETLVRITTSCADLDNILGGGISCKEVTEIGGVPGIGK 460
             +S S+  +++G Q+AWDML EE     ITTSC DLDNILGGGI+CKEVTEIGGVPGIGK
Sbjct: 61   KSSGSNANVIHGGQTAWDMLNEERFSSLITTSCLDLDNILGGGINCKEVTEIGGVPGIGK 120

Query: 461  TQLGIQLAVNVQIPFDYGGLGGKAIYIDTEGSFMVERALQIAEACGDDMVEYSHLHRKGP 640
            TQ+GIQLAVNVQIP DYGGLGGKAIYIDTEGSFMVER LQIAEAC +D+ EYSH   K  
Sbjct: 121  TQIGIQLAVNVQIPLDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDLSEYSHHFYKDN 180

Query: 641  QAWEVKMQPKDFLENIFYFRVCSYTEQIALINYLEKFITEHKDVKVVIIDSITFHFRQDF 820
            QA+ VKM P   LENIFYFRVCSYTEQIAL+NYL+KF+TEHKDVK++IIDS+TFHFRQDF
Sbjct: 181  QAFGVKMHPNSILENIFYFRVCSYTEQIALVNYLDKFVTEHKDVKIIIIDSVTFHFRQDF 240

Query: 821  EDMALRTRVLSGMALKLMKLARKFGVAVVLLNQVTTKYSDGSFHLALALGDSWSHASTNR 1000
            +DMALRTR+L  M+LKLMKLA+ F +AVV+LNQVTTK+ +GSF L LALGDSWSH+ TNR
Sbjct: 241  DDMALRTRLLGEMSLKLMKLAKNFSLAVVMLNQVTTKHIEGSFQLTLALGDSWSHSCTNR 300

Query: 1001 IILHWNGNERYAYIDKSPSLRSASAPYSVTAKGIRNSASNNKRIK 1135
            IIL+WN +ER+AYIDKSPSL+SASAPYSVT++GIRNS S++KRIK
Sbjct: 301  IILYWNDDERHAYIDKSPSLKSASAPYSVTSRGIRNSTSSSKRIK 345


>ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medicago truncatula]
            gi|357477663|ref|XP_003609117.1| DNA repair protein
            RAD51-like protein [Medicago truncatula]
            gi|355510139|gb|AES91281.1| DNA repair protein RAD51-like
            protein [Medicago truncatula] gi|355510172|gb|AES91314.1|
            DNA repair protein RAD51-like protein [Medicago
            truncatula]
          Length = 347

 Score =  489 bits (1260), Expect = e-136
 Identities = 241/345 (69%), Positives = 292/345 (84%), Gaps = 1/345 (0%)
 Frame = +2

Query: 104  MEVLRLPLSASQKGRLISAGYTSIASLSSVSPSQLALELKISEAEVLEILKSVSDGSRLE 283
            ME+  LP+SAS++G+L++AGYT++ S+   S + L  ++++SE+E LEIL   +  + L+
Sbjct: 1    MEIGMLPISASKRGKLLAAGYTTLHSILRTSTTHLVRDIEVSESEALEILNFATRSNDLD 60

Query: 284  STSSSCT-IVNGAQSAWDMLQEEETLVRITTSCADLDNILGGGISCKEVTEIGGVPGIGK 460
             +S S T +++G Q+AWDML EE     ITTSC DLDNILGGGI+CKEVTEIGGVPGIGK
Sbjct: 61   KSSGSNTNVIDGGQTAWDMLNEERFSSLITTSCLDLDNILGGGINCKEVTEIGGVPGIGK 120

Query: 461  TQLGIQLAVNVQIPFDYGGLGGKAIYIDTEGSFMVERALQIAEACGDDMVEYSHLHRKGP 640
            TQ+GIQLAVNVQIP DYGGLGGKAIYIDTEGSFMVER LQIAEAC +DM EYSH   K  
Sbjct: 121  TQIGIQLAVNVQIPLDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMSEYSHHFHKDN 180

Query: 641  QAWEVKMQPKDFLENIFYFRVCSYTEQIALINYLEKFITEHKDVKVVIIDSITFHFRQDF 820
            QA+ VKM P   LENIFYFRVCSYTEQIAL+NYL+KF+TEHKDVK++IIDS+TFHFRQDF
Sbjct: 181  QAFGVKMHPNSILENIFYFRVCSYTEQIALVNYLDKFVTEHKDVKIIIIDSVTFHFRQDF 240

Query: 821  EDMALRTRVLSGMALKLMKLARKFGVAVVLLNQVTTKYSDGSFHLALALGDSWSHASTNR 1000
            +DMALRTR+L  M+LKLMKLA+   +AVV+LNQVTTK+ +GSF L LALGDSWSH+ TNR
Sbjct: 241  DDMALRTRLLGEMSLKLMKLAKNLSLAVVMLNQVTTKHIEGSFQLTLALGDSWSHSCTNR 300

Query: 1001 IILHWNGNERYAYIDKSPSLRSASAPYSVTAKGIRNSASNNKRIK 1135
            IIL+WNG+ER+AYIDKSPSL+SASAPYSVT++GIRNS S++KRIK
Sbjct: 301  IILYWNGDERHAYIDKSPSLKSASAPYSVTSRGIRNSTSSSKRIK 345


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