BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028653
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat...   116   3e-24
emb|CBI31172.3| unnamed protein product [Vitis vinifera]              116   3e-24
ref|NP_188975.3| pentatricopeptide repeat-containing protein [Ar...   104   1e-20
ref|XP_002883423.1| pentatricopeptide repeat-containing protein ...   104   2e-20
ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   100   3e-19

>ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  116 bits (291), Expect = 3e-24
 Identities = 61/114 (53%), Positives = 80/114 (70%), Gaps = 4/114 (3%)
 Frame = -2

Query: 331 MDSIQTIIKTILKNPTQIKSKSQAKQIHAQIVKSF---PIFTSTLLSIYSKXXXXXXXXX 161
           M++ Q + KT+L+NP+ +KSKSQAKQ+HAQI+++    P   ST+LSIYS          
Sbjct: 1   MNTTQNLCKTLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSLL 60

Query: 160 XXXXXPSPPI-LAWKSIIQCYSSNGYFLESLNYFVKMHGLGMYPDHNVFPSVLK 2
                PSPP  LAWKSII+CY+S+G FL SL++F++M   G YPDHNVFPSVLK
Sbjct: 61  IFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLK 114


>emb|CBI31172.3| unnamed protein product [Vitis vinifera]
          Length = 644

 Score =  116 bits (291), Expect = 3e-24
 Identities = 61/114 (53%), Positives = 80/114 (70%), Gaps = 4/114 (3%)
 Frame = -2

Query: 331 MDSIQTIIKTILKNPTQIKSKSQAKQIHAQIVKSF---PIFTSTLLSIYSKXXXXXXXXX 161
           M++ Q + KT+L+NP+ +KSKSQAKQ+HAQI+++    P   ST+LSIYS          
Sbjct: 1   MNTTQNLCKTLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSLL 60

Query: 160 XXXXXPSPPI-LAWKSIIQCYSSNGYFLESLNYFVKMHGLGMYPDHNVFPSVLK 2
                PSPP  LAWKSII+CY+S+G FL SL++F++M   G YPDHNVFPSVLK
Sbjct: 61  IFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLK 114


>ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g23330 gi|11994318|dbj|BAB02277.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332643232|gb|AEE76753.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  104 bits (260), Expect = 1e-20
 Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 3/113 (2%)
 Frame = -2

Query: 331 MDSIQTIIKTILKNPTQIKSKSQAKQIHAQIVKSFPIF---TSTLLSIYSKXXXXXXXXX 161
           M S + +IKT++KNPT+IKSKSQAKQ+HAQ +++  +     S ++SIY+          
Sbjct: 1   MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALL 60

Query: 160 XXXXXPSPPILAWKSIIQCYSSNGYFLESLNYFVKMHGLGMYPDHNVFPSVLK 2
                 SPP+LAWKS+I+C++    F ++L  FV+M   G  PDHNVFPSVLK
Sbjct: 61  LFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLK 113


>ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329263|gb|EFH59682.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 679

 Score =  104 bits (259), Expect = 2e-20
 Identities = 52/113 (46%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
 Frame = -2

Query: 331 MDSIQTIIKTILKNPTQIKSKSQAKQIHAQIVKSFPIF---TSTLLSIYSKXXXXXXXXX 161
           M S + +IKT++KNPT+IKSKSQAKQ+HAQ +++  +     S ++SIY+          
Sbjct: 1   MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALL 60

Query: 160 XXXXXPSPPILAWKSIIQCYSSNGYFLESLNYFVKMHGLGMYPDHNVFPSVLK 2
                 SPP+LAWKS+I+C++    F  +L  FV+M   G  PDHNVFPSVLK
Sbjct: 61  VFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLK 113


>ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  100 bits (249), Expect = 3e-19
 Identities = 53/111 (47%), Positives = 70/111 (63%), Gaps = 3/111 (2%)
 Frame = -2

Query: 325 SIQTIIKTILKNPTQIKSKSQAKQIHAQIVK---SFPIFTSTLLSIYSKXXXXXXXXXXX 155
           S + ++K +L+NP  IKS+SQA+Q+HAQ++K   S     S LLSIYS            
Sbjct: 4   STEALVKALLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLF 63

Query: 154 XXXPSPPILAWKSIIQCYSSNGYFLESLNYFVKMHGLGMYPDHNVFPSVLK 2
                PP LAWKS+I+CY+S+G   +SL  F+ M   G+YPDHNVFPSVLK
Sbjct: 64  NTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLK 114