BLASTX nr result

ID: Atractylodes21_contig00028651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028651
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]   117   1e-24
ref|XP_002267711.2| PREDICTED: general transcription factor IIH ...   116   2e-24
emb|CBI25875.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002305144.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_004134713.1| PREDICTED: general transcription factor IIH ...   113   2e-23

>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
          Length = 451

 Score =  117 bits (292), Expect = 1e-24
 Identities = 51/69 (73%), Positives = 60/69 (86%)
 Frame = +2

Query: 2   IRLWESDLNRVEMTPAHFFDDFPSRDVFEAACDFAREYGSLLWEDSKKMRLIVKTEIYAH 181
           IRLWE+DLNRVE  P+H +D+FPSRDVFEAACDFAREYG LLWEDSKKMRL+VK EI+ H
Sbjct: 383 IRLWETDLNRVETMPSHLYDEFPSRDVFEAACDFAREYGGLLWEDSKKMRLVVKAEIHLH 442

Query: 182 MKDFLSHQK 208
           M+++L   K
Sbjct: 443 MREYLRRSK 451


>ref|XP_002267711.2| PREDICTED: general transcription factor IIH subunit 4-like [Vitis
           vinifera]
          Length = 238

 Score =  116 bits (291), Expect = 2e-24
 Identities = 51/69 (73%), Positives = 60/69 (86%)
 Frame = +2

Query: 2   IRLWESDLNRVEMTPAHFFDDFPSRDVFEAACDFAREYGSLLWEDSKKMRLIVKTEIYAH 181
           IRLWE+DLNRVE  P+H +D+FPSRDVFEAACDFAREYG LLWEDSKKMRL+VK EI+ H
Sbjct: 170 IRLWETDLNRVETMPSHLYDEFPSRDVFEAACDFAREYGGLLWEDSKKMRLVVKAEIHLH 229

Query: 182 MKDFLSHQK 208
           M+++L   K
Sbjct: 230 MREYLRRPK 238


>emb|CBI25875.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  116 bits (291), Expect = 2e-24
 Identities = 51/69 (73%), Positives = 60/69 (86%)
 Frame = +2

Query: 2   IRLWESDLNRVEMTPAHFFDDFPSRDVFEAACDFAREYGSLLWEDSKKMRLIVKTEIYAH 181
           IRLWE+DLNRVE  P+H +D+FPSRDVFEAACDFAREYG LLWEDSKKMRL+VK EI+ H
Sbjct: 190 IRLWETDLNRVETMPSHLYDEFPSRDVFEAACDFAREYGGLLWEDSKKMRLVVKAEIHLH 249

Query: 182 MKDFLSHQK 208
           M+++L   K
Sbjct: 250 MREYLRRPK 258


>ref|XP_002305144.1| predicted protein [Populus trichocarpa] gi|222848108|gb|EEE85655.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score =  115 bits (287), Expect = 5e-24
 Identities = 50/69 (72%), Positives = 62/69 (89%)
 Frame = +2

Query: 2   IRLWESDLNRVEMTPAHFFDDFPSRDVFEAACDFAREYGSLLWEDSKKMRLIVKTEIYAH 181
           IRLWE+DLNRVE+TP+HF+D+FPSRD FEAACDFARE+  LLWEDSKKMR++VK EI+ +
Sbjct: 381 IRLWEADLNRVEITPSHFYDEFPSRDTFEAACDFAREWNGLLWEDSKKMRVVVKAEIHMN 440

Query: 182 MKDFLSHQK 208
           M++FL  QK
Sbjct: 441 MREFLRGQK 449


>ref|XP_004134713.1| PREDICTED: general transcription factor IIH subunit 4-like [Cucumis
           sativus]
          Length = 451

 Score =  113 bits (282), Expect = 2e-23
 Identities = 48/69 (69%), Positives = 61/69 (88%)
 Frame = +2

Query: 2   IRLWESDLNRVEMTPAHFFDDFPSRDVFEAACDFAREYGSLLWEDSKKMRLIVKTEIYAH 181
           IRLWESDLNRV++TPAHF+D+FPSR+VFEAACD+ARE+  LLWEDSK +RL+VK +I+ H
Sbjct: 383 IRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTH 442

Query: 182 MKDFLSHQK 208
           M++ L  QK
Sbjct: 443 MREHLRRQK 451


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