BLASTX nr result

ID: Atractylodes21_contig00028639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028639
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...   125   1e-26
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...   114   2e-23
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...   114   2e-23
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   114   2e-23
gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncat...   112   6e-23

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score =  125 bits (313), Expect = 1e-26
 Identities = 77/216 (35%), Positives = 116/216 (53%), Gaps = 4/216 (1%)
 Frame = +2

Query: 89  PEPSRVSLVSSATSNNR---GDPIPNSSSRNCGSHTLSRSEWEERRRKGLCFKCGQQYEP 259
           P  S  +  SS  S+ R   G P   ++ R  G  ++   E+EERR KGLCFKCG +Y P
Sbjct: 282 PNGSNTNSTSSLFSSARRVDGGPRSGTTDRWKGIRSIHNEEFEERRAKGLCFKCGGKYHP 341

Query: 260 S-HKCPEANLRVLLLADDEELSPEGEIHLLEHSEPQLSIEGRDLEVGECSVLEFNGTVTD 436
           + HKC E  LRVL+L + E ++ EGEI  ++     +++E  +    EC ++   G++  
Sbjct: 342 TFHKCLERALRVLILGEGETMTKEGEIVSMK----DVTVESEEEVEVECKLMGVLGSMG- 396

Query: 437 HTPEFKTFKXXXXXXXXXXXXXXDSGATHNFVSRKLTQALGLPTMEFGGLHIKLGDGHKI 616
              E  T +              DSGA+HNF+S K+T ALGL         IKLGDGH++
Sbjct: 397 ---ESHTMRVEGKIHNVDLLVLIDSGASHNFISPKVTTALGLVITPTVAKSIKLGDGHRL 453

Query: 617 LITKKCTDLPISLGGGHFTVNALLFDMENLDMVLGI 724
           +    C  + + +GG    V+AL+ ++  +DMVLG+
Sbjct: 454 ITNGVCKGVNMQMGGIEVIVDALVLELGGMDMVLGV 489


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score =  114 bits (286), Expect = 2e-23
 Identities = 72/183 (39%), Positives = 100/183 (54%), Gaps = 3/183 (1%)
 Frame = +2

Query: 104 VSLVSSATSNNRG--DPIPNSSSRNCGSHTLSRSEWEERRRKGLCFKCGQQYEPS-HKCP 274
           +S +S A++  +G  D     S +  G  ++  +E  ERR KGLCFKCG +Y P+ HKCP
Sbjct: 272 ISTLSLASTGRKGETDTRTGVSEKWKGVRSIRNNEMAERRAKGLCFKCGGKYHPTLHKCP 331

Query: 275 EANLRVLLLADDEELSPEGEIHLLEHSEPQLSIEGRDLEVGECSVLEFNGTVTDHTPEFK 454
           E  LRVL+L + E L+ EGEI  +E  +P    E   +EV EC  +   G++ +H    +
Sbjct: 332 ERALRVLILGEGEALNDEGEIMAMEAVQPDSEEE---IEV-ECKSMGVLGSMGEH----R 383

Query: 455 TFKXXXXXXXXXXXXXXDSGATHNFVSRKLTQALGLPTMEFGGLHIKLGDGHKILITKKC 634
           T K              DSGA+HNF+S ++T ALGL        HIKLGDGHK++    C
Sbjct: 384 TMKIEGKIENVDVLVLIDSGASHNFISPQVTTALGLTITASVAKHIKLGDGHKVVSEGVC 443

Query: 635 TDL 643
             L
Sbjct: 444 YGL 446


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  114 bits (286), Expect = 2e-23
 Identities = 68/154 (44%), Positives = 86/154 (55%), Gaps = 1/154 (0%)
 Frame = +2

Query: 176  GSHTLSRSEWEERRRKGLCFKCGQQYEPS-HKCPEANLRVLLLADDEELSPEGEIHLLEH 352
            G  ++   E  ERR KGLCFKCG +Y P+ HKCPE +LRVL+L + E ++ EGEI  LE 
Sbjct: 923  GVRSIQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIVSLET 982

Query: 353  SEPQLSIEGRDLEVGECSVLEFNGTVTDHTPEFKTFKXXXXXXXXXXXXXXDSGATHNFV 532
             E  L  E  ++E  EC V+   G++     E+ T K              DSGATHNF+
Sbjct: 983  QEV-LEEEEEEIE-SECKVIGVLGSMG----EYNTMKIGGKLENIDVVVLVDSGATHNFI 1036

Query: 533  SRKLTQALGLPTMEFGGLHIKLGDGHKILITKKC 634
            S KLT ALGL         IKLGDGH++L    C
Sbjct: 1037 SAKLTSALGLTITPMAARKIKLGDGHEVLSQGVC 1070


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score =  114 bits (285), Expect = 2e-23
 Identities = 66/180 (36%), Positives = 96/180 (53%)
 Frame = +2

Query: 188 LSRSEWEERRRKGLCFKCGQQYEPSHKCPEANLRVLLLADDEELSPEGEIHLLEHSEPQL 367
           LS +E  ER++KGLCFKCG  + P H+CP+  LRVL+L +DEE  PEG++         L
Sbjct: 99  LSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEPEGKL---------L 149

Query: 368 SIEGRDLEVGECSVLEFNGTVTDHTPEFKTFKXXXXXXXXXXXXXXDSGATHNFVSRKLT 547
           ++E  D E G+  +         H+   ++ K              DSGATHNF+S++L 
Sbjct: 150 AVEVDDEEEGDGEMCMMEFFHLGHSRP-QSIKLMGVIKEVPVVVLVDSGATHNFISQQLV 208

Query: 548 QALGLPTMEFGGLHIKLGDGHKILITKKCTDLPISLGGGHFTVNALLFDMENLDMVLGIE 727
             +    ++   + IKLGDG        C  L + +G  H  ++A LFD+  +DMVLGIE
Sbjct: 209 HKMNWAVVDTPCMSIKLGDGSYSKTKGTCEGLEVDVGDVHLEIDAQLFDLGGVDMVLGIE 268


>gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score =  112 bits (281), Expect = 6e-23
 Identities = 67/198 (33%), Positives = 101/198 (51%), Gaps = 1/198 (0%)
 Frame = +2

Query: 134 NRGDPIPNSSSRNCGSHTLSRSEWEERRRKGLCFKCGQQYEPSHKCPEANLRVLLLADDE 313
           N+   I  ++ R+    +LS  E  +RR+KGLCFKCG  Y P H+CP+ NL V++L DD 
Sbjct: 32  NKTHTINTANWRDKNVRSLSSQEIADRRQKGLCFKCGGPYHPRHQCPDKNLSVMVLEDDS 91

Query: 314 ELSPEGEIHLLEHSEPQLSIEGRDLEVGEC-SVLEFNGTVTDHTPEFKTFKXXXXXXXXX 490
           E   E E+ +L   +     E   L V    + L F+     +   F+  +         
Sbjct: 92  E--DENEVRVLNDEDVDTGAEELQLNVLTFENALTFDRQTEYYQDRFQCIRFQGKVREIP 149

Query: 491 XXXXXDSGATHNFVSRKLTQALGLPTMEFGGLHIKLGDGHKILITKKCTDLPISLGGGHF 670
                DSGA  NF+SR+L  ALGL   E     I+LGDGH +    +C  + IS+ G  +
Sbjct: 150 VLMLVDSGANKNFMSRRLALALGLRITETPVRRIRLGDGHVVPTLGECHGVIISVQGVEW 209

Query: 671 TVNALLFDMENLDMVLGI 724
            ++ +LF++   D+VLG+
Sbjct: 210 EIDVMLFELRGYDLVLGM 227


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