BLASTX nr result

ID: Atractylodes21_contig00028612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028612
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 110   2e-22
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     101   1e-19
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|...   101   1e-19
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 100   2e-19
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g...   100   4e-19

>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  110 bits (275), Expect = 2e-22
 Identities = 56/104 (53%), Positives = 67/104 (64%), Gaps = 16/104 (15%)
 Frame = -2

Query: 617  TFSPGDLVWINLRKERFPSKQKNKPMPRAEGPFKILERVGDNAYKVELPGDSTVSSTINV 438
            +F PGDLVWI+LRKERFP K+KNK MPRA+GPF++LE+ G NAYK+ LPG+  V  T NV
Sbjct: 1361 SFEPGDLVWIHLRKERFPEKRKNKLMPRADGPFEVLEKFGSNAYKINLPGEYGVHGTFNV 1420

Query: 437  GNLMP--------SLEDLEANPFLEAEY--------HVKASSGP 354
            G+L P         LEDL ANPF E E         H+    GP
Sbjct: 1421 GDLSPYYEEIEEDKLEDLRANPFQEGEIETNQTEKGHISPGFGP 1464


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  101 bits (252), Expect = 1e-19
 Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 5/84 (5%)
 Frame = -2

Query: 617  TFSPGDLVWINLRKERFPSKQKNKPMPRAEGPFKILERVGDNAYKVELPGDSTVSSTINV 438
            TF PGDLVW++LRK+RFP K+K+K MPR +GPF++L ++ DNAYK+ELP D  VSST NV
Sbjct: 1479 TFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSSTFNV 1538

Query: 437  GNLMP--SLEDLEAN---PFLEAE 381
             +L P   LED E++   PF E E
Sbjct: 1539 ADLTPFFGLEDSESSRSTPFQEGE 1562


>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 681

 Score =  101 bits (252), Expect = 1e-19
 Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 5/84 (5%)
 Frame = -2

Query: 617 TFSPGDLVWINLRKERFPSKQKNKPMPRAEGPFKILERVGDNAYKVELPGDSTVSSTINV 438
           TF PGDLVW++LRK+RFP K+K+K MPR +GPF++L ++ DNAYK+ELP D  VSST NV
Sbjct: 447 TFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSSTFNV 506

Query: 437 GNLMP--SLEDLEAN---PFLEAE 381
            +L P   LED E++   PF E E
Sbjct: 507 ADLTPFFGLEDSESSRSTPFQEGE 530


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  100 bits (249), Expect = 2e-19
 Identities = 43/68 (63%), Positives = 57/68 (83%)
 Frame = -2

Query: 614  FSPGDLVWINLRKERFPSKQKNKPMPRAEGPFKILERVGDNAYKVELPGDSTVSSTINVG 435
            F PGDLVWI+LRKERFP+K+KNK MPR++GPF+++E++G +AYK++LPGD  V  T NVG
Sbjct: 1374 FEPGDLVWIHLRKERFPAKRKNKLMPRSDGPFEVVEKIGPSAYKIDLPGDYGVHGTFNVG 1433

Query: 434  NLMPSLED 411
            +L P  ED
Sbjct: 1434 DLSPYYED 1441


>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
           gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
           Japonica Group]
          Length = 681

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 48/84 (57%), Positives = 62/84 (73%), Gaps = 5/84 (5%)
 Frame = -2

Query: 617 TFSPGDLVWINLRKERFPSKQKNKPMPRAEGPFKILERVGDNAYKVELPGDSTVSSTINV 438
           TF PGDLVW++LRK+RFP K+K+K MPR +GPF++L ++ DNAYK+ELP D  VS T NV
Sbjct: 447 TFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSPTFNV 506

Query: 437 GNLMP--SLEDLEAN---PFLEAE 381
            +L P   LED E++   PF E E
Sbjct: 507 ADLTPFFGLEDSESSRSTPFQEGE 530


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