BLASTX nr result

ID: Atractylodes21_contig00028478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028478
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28838.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like ...   133   2e-29
ref|XP_004151942.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...   124   6e-27
tpg|DAA59105.1| TPA: hypothetical protein ZEAMMB73_882578 [Zea m...   112   3e-23
ref|XP_002881232.1| predicted protein [Arabidopsis lyrata subsp....   112   3e-23

>emb|CBI28838.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score =  133 bits (334), Expect = 2e-29
 Identities = 67/85 (78%), Positives = 76/85 (89%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   VHSEAYKVLGGINRVGQDLEQDNV-EDGNTDSDQGKQNSKKEQERKLSPLSTLESSLDTL 178
           VHSEAYKVLGGINRVGQ+ EQDNV ED N +S+Q + +SKKE +RK+SPLSTLESS + L
Sbjct: 143 VHSEAYKVLGGINRVGQENEQDNVVEDANVNSEQEEGHSKKELDRKISPLSTLESSFEVL 202

Query: 179 NVKKFDVAFAVDPLYHQTSAQFDEG 253
           N+KKFDVAFAVDPLYHQTSAQFDEG
Sbjct: 203 NLKKFDVAFAVDPLYHQTSAQFDEG 227


>ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like [Vitis vinifera]
          Length = 674

 Score =  133 bits (334), Expect = 2e-29
 Identities = 67/85 (78%), Positives = 76/85 (89%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   VHSEAYKVLGGINRVGQDLEQDNV-EDGNTDSDQGKQNSKKEQERKLSPLSTLESSLDTL 178
           VHSEAYKVLGGINRVGQ+ EQDNV ED N +S+Q + +SKKE +RK+SPLSTLESS + L
Sbjct: 143 VHSEAYKVLGGINRVGQENEQDNVVEDANVNSEQEEGHSKKELDRKISPLSTLESSFEVL 202

Query: 179 NVKKFDVAFAVDPLYHQTSAQFDEG 253
           N+KKFDVAFAVDPLYHQTSAQFDEG
Sbjct: 203 NLKKFDVAFAVDPLYHQTSAQFDEG 227


>ref|XP_004151942.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Cucumis sativus] gi|449490353|ref|XP_004158580.1|
           PREDICTED: LOW QUALITY PROTEIN: condensin complex
           subunit 2-like [Cucumis sativus]
          Length = 667

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/84 (71%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
 Frame = +2

Query: 5   HSEAYKVLGGINRVGQDLEQDNV-EDGNTDSDQGKQNSKKEQERKLSPLSTLESSLDTLN 181
           HSEAYKVLGG+NR GQ+ EQ+ + ++GN ++DQ +  S+KEQ++KLSPLSTLE S + LN
Sbjct: 143 HSEAYKVLGGMNRAGQENEQETITQEGNPENDQEEVRSRKEQDKKLSPLSTLEPSFEALN 202

Query: 182 VKKFDVAFAVDPLYHQTSAQFDEG 253
           VKKFDVAFAVDPLYHQTSAQFDEG
Sbjct: 203 VKKFDVAFAVDPLYHQTSAQFDEG 226


>tpg|DAA59105.1| TPA: hypothetical protein ZEAMMB73_882578 [Zea mays]
          Length = 529

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/84 (65%), Positives = 65/84 (77%)
 Frame = +2

Query: 2   VHSEAYKVLGGINRVGQDLEQDNVEDGNTDSDQGKQNSKKEQERKLSPLSTLESSLDTLN 181
           VHSEAYKVLGGINR G+  E D  E  N +  Q +  +KK+ +R++SP STLESS + LN
Sbjct: 148 VHSEAYKVLGGINRAGRGEEADLEEGSNVEPAQDEAINKKDADRRISPASTLESSFEALN 207

Query: 182 VKKFDVAFAVDPLYHQTSAQFDEG 253
           VKKFDVAF VDPLYHQT+AQFDEG
Sbjct: 208 VKKFDVAFTVDPLYHQTTAQFDEG 231


>ref|XP_002881232.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327071|gb|EFH57491.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 704

 Score =  112 bits (280), Expect = 3e-23
 Identities = 58/84 (69%), Positives = 63/84 (75%)
 Frame = +2

Query: 2   VHSEAYKVLGGINRVGQDLEQDNVEDGNTDSDQGKQNSKKEQERKLSPLSTLESSLDTLN 181
           VHSEAYKVLGGI R G D   DN +   T   +   N KK+ E+K+SPLSTLE S D LN
Sbjct: 142 VHSEAYKVLGGITRAGHDDSGDNEDAAGTV--ENATNQKKQTEKKISPLSTLEPSFDALN 199

Query: 182 VKKFDVAFAVDPLYHQTSAQFDEG 253
           VKKFDVAFAVDPLYHQTSAQFDEG
Sbjct: 200 VKKFDVAFAVDPLYHQTSAQFDEG 223


Top