BLASTX nr result

ID: Atractylodes21_contig00028468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028468
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vi...    58   7e-07
emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]    58   7e-07
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    57   1e-06
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    57   2e-06

>ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1233

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = +1

Query: 49  WRSALNSLTSQEGGLHSKVQDILQRSFNTLPFDSLKELFLHIACFFVGEYENYVVKILEH 228
           W S L+ L  +   L++KVQD+L+ SF+ L F   KE+FL +ACFF G+  ++V+KIL+ 
Sbjct: 405 WESELHKLKKE---LNTKVQDVLRISFDGLDFTQ-KEIFLDLACFFKGQEYDFVIKILDG 460

Query: 229 -DWHAKSGI 252
             +HAKSGI
Sbjct: 461 CGFHAKSGI 469


>emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]
          Length = 1244

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = +1

Query: 49  WRSALNSLTSQEGGLHSKVQDILQRSFNTLPFDSLKELFLHIACFFVGEYENYVVKILEH 228
           W S L+ L  +   L++KVQD+L+ SF+ L F   KE+FL +ACFF G+  ++V+KIL+ 
Sbjct: 405 WESELHKLKKE---LNTKVQDVLRISFDGLDFTQ-KEIFLDLACFFKGQEYDFVIKILDG 460

Query: 229 -DWHAKSGI 252
             +HAKSGI
Sbjct: 461 CGFHAKSGI 469


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223548234|gb|EEF49725.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = +1

Query: 31  NEIIEIWRSALNSLTSQEGGLHSKVQDILQRSFNTLPFDSLKELFLHIACFFVGEYENYV 210
           +++ + W S L  L +     H K+Q  LQ S+++L  D  K LFLHIACFF G  ++YV
Sbjct: 394 DKMADEWESELEKLKAIP---HPKIQKSLQISYDSLQDDKYKNLFLHIACFFTGRDKDYV 450

Query: 211 VKILEH-DWHAKSGI 252
           VK+L+  + +AK GI
Sbjct: 451 VKVLDGCELYAKVGI 465


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223541425|gb|EEF42975.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/62 (50%), Positives = 40/62 (64%)
 Frame = +1

Query: 40  IEIWRSALNSLTSQEGGLHSKVQDILQRSFNTLPFDSLKELFLHIACFFVGEYENYVVKI 219
           IE+W SAL  L   E    SK+Q IL+ S+++L  D  K LFL IACFF G  +NYV+ I
Sbjct: 409 IEVWESALQKL---EAVPDSKIQKILRVSYDSLEDDHDKNLFLDIACFFTGMEKNYVISI 465

Query: 220 LE 225
           L+
Sbjct: 466 LQ 467


Top