BLASTX nr result

ID: Atractylodes21_contig00028427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028427
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27413.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002267498.2| PREDICTED: putative U-box domain-containing ...    83   2e-14
ref|XP_002315995.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_004135423.1| PREDICTED: putative U-box domain-containing ...    67   2e-09
ref|XP_002311419.1| predicted protein [Populus trichocarpa] gi|2...    65   5e-09

>emb|CBI27413.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 60/138 (43%), Positives = 87/138 (63%), Gaps = 5/138 (3%)
 Frame = +2

Query: 8   TSDVKSLLLFISEITK--LSIATENENFIRIGCYFYRVSLVIMELESSENTPRNAAEILQ 181
           +S ++SLL+ ISEIT   + I  E E+F+ +G Y YR S  I+EL++++NTP NA  ILQ
Sbjct: 22  SSLIQSLLVSISEITASVVCINVEQESFMELGSYLYRTSPAIIELQTTKNTPENAMRILQ 81

Query: 182 SLSECICIAKDLSSKCNKQQINMIIPDQEVESIIKQLERVIRQMGEVLKSIKSS---SGE 352
           SLS+ + +AK+L  +  K   +  I D E+ SII+QLE VI+ MGE L  I  S   + E
Sbjct: 82  SLSKSVDLAKNLVGQLQKD--SHPISDPELGSIIEQLEGVIKLMGEELSLIPPSTFGNQE 139

Query: 353 YFHHAVQSLVKDINTFCF 406
           Y   AV+S+ K++    F
Sbjct: 140 YAEIAVRSVSKEMQNARF 157


>ref|XP_002267498.2| PREDICTED: putative U-box domain-containing protein 42-like [Vitis
           vinifera]
          Length = 1055

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 58/156 (37%), Positives = 83/156 (53%), Gaps = 18/156 (11%)
 Frame = +2

Query: 62  IATENENFIRIGCYFYRVSLVIMELESSENTPRNAAEILQSLSECICIAKDLSSKCNKQQ 241
           I  E E+F+ +G Y YR S  I+EL++++NTP NA  ILQSLS+ + +AK+L  +  K  
Sbjct: 63  INVEQESFMELGSYLYRTSPAIIELQTTKNTPENAMRILQSLSKSVDLAKNLVGQLQKD- 121

Query: 242 INMIIPDQEVESIIKQLERVIRQMGEVLKSIKSS---SGEYFHHAVQSLVKDINTFCF-- 406
            +  I D E+ SII+QLE VI+ MGE L  I  S   + EY   AV+S+ K++    F  
Sbjct: 122 -SHPISDPELGSIIEQLEGVIKLMGEELSLIPPSTFGNQEYAEIAVRSVSKEMQNARFGV 180

Query: 407 -------------ETREFHTIENVDVHKEKDLYSIN 475
                               +    V  E+DLYSI+
Sbjct: 181 CQTQVTSPKALQPRALSLEELPKEQVPTERDLYSID 216


>ref|XP_002315995.1| predicted protein [Populus trichocarpa] gi|222865035|gb|EEF02166.1|
           predicted protein [Populus trichocarpa]
          Length = 935

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/91 (48%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
 Frame = +2

Query: 128 MELESSENTPRNAAEILQSLSECICIAKDLSSKCNKQQINMIIPDQEVESIIKQLERVIR 307
           MEL+++E+TP+NA  ILQSLS  I  AKDL +KC +   +    D E++S I  LERVI 
Sbjct: 1   MELQTTEHTPKNAMVILQSLSRSITEAKDLVNKCQRGTNSNF--DSELKSTISLLERVIE 58

Query: 308 QMGEVLKSIKSSS---GEYFHHAVQSLVKDI 391
            MGE L SI SS+    EY   AVQ+L  ++
Sbjct: 59  DMGECLSSIPSSTFQDQEYAEVAVQALSNEM 89


>ref|XP_004135423.1| PREDICTED: putative U-box domain-containing protein 42-like
           [Cucumis sativus] gi|449493524|ref|XP_004159331.1|
           PREDICTED: putative U-box domain-containing protein
           42-like [Cucumis sativus]
          Length = 1015

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
 Frame = +2

Query: 11  SDVKSLLLFISEITKLSIATENEN--FIRIGCYFYRVSLVIMELESSENTPRNAAEILQS 184
           S  + +L  ISEI   +  TE E+  FI IG YFYR +L + EL++ +  P    EILQS
Sbjct: 8   SSAEVVLASISEIIDSTACTEEEHGEFIEIGSYFYRAALAVEELQALD--PTKFDEILQS 65

Query: 185 LSECICIAKDLSSKCNKQQINMIIPDQEVESIIKQLERVIRQMGEVLKSIKSSS---GEY 355
           L++ I +AK L  K        ++ + +  SII  LE VI+QMGE L  I +++     Y
Sbjct: 66  LNKSINLAKYLLEKFLTS--IQLVSNSDPISIINPLEEVIKQMGECLNKIATATFKEQNY 123

Query: 356 FHHAVQSLVKDINTFCFETREFHTIENVDVHK--------------EKDLYSIN 475
              A+ SL  ++     +  +   I N+   +              EKDLY I+
Sbjct: 124 VKVAILSLSDEMKNISIKIDQAQAIMNMQEIQTSLEEQSEKVPEVIEKDLYPID 177


>ref|XP_002311419.1| predicted protein [Populus trichocarpa] gi|222851239|gb|EEE88786.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
 Frame = +2

Query: 128 MELESSENTPRNAAEILQSLSECICIAKDLSSKCNKQQINMIIPDQEVESIIKQLERVIR 307
           MEL+ +E T  NA EILQSLS  I  AKDL +KC +  I+    + E++S +  LERVI+
Sbjct: 1   MELQKAEYTTNNATEILQSLSRSITEAKDLVNKCQRGTISN--SESELKSNMSHLERVIK 58

Query: 308 QMGEVLKSIKSSS---GEYFHHAVQSLVKDINTFCFETREFHTIE--NVDVHK 451
           +MG  L  I SS+    EY   +VQ+L  ++ +  FE  +   ++   +D HK
Sbjct: 59  EMGACLTLIPSSTFQGQEYAEVSVQALSNEMLSAHFEVGQSQGLQTKELDPHK 111


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