BLASTX nr result

ID: Atractylodes21_contig00028416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028416
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526557.1| conserved hypothetical protein [Ricinus comm...    61   8e-08
ref|XP_002321289.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_002526557.1| conserved hypothetical protein [Ricinus communis]
           gi|223534118|gb|EEF35835.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 122

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
 Frame = -2

Query: 383 RWRRKIHCSDDTITVAGGRRRR------GSNVLKQLRWRLKSQWKQALAWQTTTKKRHGY 222
           +W ++I  ++  IT+   R R       G  VL+QL W+ ++QWKQAL W+  + K + Y
Sbjct: 39  KWGKRIATTESAITLGNVRNRVPFSCCCGLRVLRQLLWKFRTQWKQALGWRRNSVK-YSY 97

Query: 221 DPQSYSHNFDDGFF 180
           D  SYS NFDDG +
Sbjct: 98  DIHSYSLNFDDGLY 111


>ref|XP_002321289.1| predicted protein [Populus trichocarpa] gi|222862062|gb|EEE99604.1|
           predicted protein [Populus trichocarpa]
          Length = 93

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
 Frame = -2

Query: 383 RWRRKIHCSDDTITVAGGRRRR------GSNVLKQLRWRLKSQWKQALAWQTTTKKRHGY 222
           RWR +   +   +T+   +RR       GS+ L QL W+ ++QWKQA  WQ ++  +  Y
Sbjct: 20  RWRSRNSSTGSAVTLVSVKRRLPFCRHGGSSFLMQLFWKFRTQWKQAFRWQRSS-AQCSY 78

Query: 221 DPQSYSHNFDDG 186
           D  SYS NFDDG
Sbjct: 79  DLYSYSLNFDDG 90


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