BLASTX nr result

ID: Atractylodes21_contig00028411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028411
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514767.1| conserved hypothetical protein [Ricinus comm...   103   2e-20
ref|XP_002311274.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-20
gb|ADI48326.1| putative low density lipoprotein B-like protein [...    93   3e-17
ref|XP_004163062.1| PREDICTED: conserved oligomeric Golgi comple...    91   1e-16
ref|XP_004152888.1| PREDICTED: conserved oligomeric Golgi comple...    91   1e-16

>ref|XP_002514767.1| conserved hypothetical protein [Ricinus communis]
           gi|223545818|gb|EEF47321.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1065

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/80 (66%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
 Frame = -1

Query: 236 SLSSPTISLNS--VSSNPARARIYGIACRIKYLVDTPENIWGCLDESMFLDAAARYTRAK 63
           SLS+  +S      + NPAR RIYGIACR+KYLVDTPENIWGCLDESMFL+AAARY RAK
Sbjct: 94  SLSASPVSQTPKFTNPNPARLRIYGIACRVKYLVDTPENIWGCLDESMFLEAAARYIRAK 153

Query: 62  LVHHSLTSNENSKSVLSKFP 3
            VH +L S  + K +LS FP
Sbjct: 154 HVHFNLNSTSDPK-ILSNFP 172


>ref|XP_002311274.1| predicted protein [Populus trichocarpa] gi|222851094|gb|EEE88641.1|
           predicted protein [Populus trichocarpa]
          Length = 1071

 Score =  100 bits (250), Expect = 9e-20
 Identities = 52/95 (54%), Positives = 68/95 (71%), Gaps = 12/95 (12%)
 Frame = -1

Query: 251 GGILHSLSSPTISLNSVSSNP------------ARARIYGIACRIKYLVDTPENIWGCLD 108
           G I H+++S  IS+ S+S++P             R +IYGIACR+KYLVDTPENIWGCLD
Sbjct: 80  GSISHNIASIHISIRSLSASPLSETPKFTNPSSTRGKIYGIACRVKYLVDTPENIWGCLD 139

Query: 107 ESMFLDAAARYTRAKLVHHSLTSNENSKSVLSKFP 3
           E MFL+AA RYTRAK V ++L S++ +K +LS FP
Sbjct: 140 EFMFLEAAGRYTRAKHVQNTLMSSDYNK-ILSNFP 173


>gb|ADI48326.1| putative low density lipoprotein B-like protein [Corchorus
           olitorius]
          Length = 1070

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 10/91 (10%)
 Frame = -1

Query: 245 ILHSLSSPTISLNSVSS------NP-ARARIYGIACRIKYLVDTPENIWGCLDESMFLDA 87
           I HS+ S ++S++ V S      NP  R RIY +ACR+KYLVDTPENIWGCLDE MFL+A
Sbjct: 70  IHHSIRSLSLSVSEVPSPKLQSPNPNTRLRIYAVACRVKYLVDTPENIWGCLDEYMFLEA 129

Query: 86  AARYTRAKLVHHSL---TSNENSKSVLSKFP 3
           AARY RAK VH +L    S+ +  ++LS +P
Sbjct: 130 AARYVRAKHVHSNLILRNSDLDHNNILSNYP 160


>ref|XP_004163062.1| PREDICTED: conserved oligomeric Golgi complex subunit 1-like
           [Cucumis sativus]
          Length = 1057

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
 Frame = -1

Query: 242 LHSLSSPTISLNSVSSNPARARIYGIACRIKYLVDTPENIWGCLDESMFLDAAARYTRAK 63
           + SLSS  +     S+N  R  +Y IACR+KYLVDTPENIWGCLDESMFL+AA R+ RAK
Sbjct: 87  IRSLSSSDLLTLLPSNNHVRVTLYAIACRVKYLVDTPENIWGCLDESMFLEAAVRHLRAK 146

Query: 62  LVHHSLTSN--ENSKSVLSKFP 3
            V  +LT++  ++ +  LS FP
Sbjct: 147 HVQQALTTHNADSDRKFLSNFP 168


>ref|XP_004152888.1| PREDICTED: conserved oligomeric Golgi complex subunit 1-like
           [Cucumis sativus]
          Length = 1057

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
 Frame = -1

Query: 242 LHSLSSPTISLNSVSSNPARARIYGIACRIKYLVDTPENIWGCLDESMFLDAAARYTRAK 63
           + SLSS  +     S+N  R  +Y IACR+KYLVDTPENIWGCLDESMFL+AA R+ RAK
Sbjct: 87  IRSLSSSDLLTLLPSNNHVRVTLYAIACRVKYLVDTPENIWGCLDESMFLEAAVRHLRAK 146

Query: 62  LVHHSLTSN--ENSKSVLSKFP 3
            V  +LT++  ++ +  LS FP
Sbjct: 147 HVQQALTTHNADSDRKFLSNFP 168


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