BLASTX nr result

ID: Atractylodes21_contig00028373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028373
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36552.3| unnamed protein product [Vitis vinifera]              161   5e-38
ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containi...   161   5e-38
ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containi...   147   1e-33
ref|XP_002309359.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   144   6e-33

>emb|CBI36552.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  161 bits (408), Expect = 5e-38
 Identities = 74/96 (77%), Positives = 84/96 (87%)
 Frame = -1

Query: 288 SGVSFISVLYACSHSGLVREGEEIFYAMVQDHGFKPLPEHYVCMVDLLGRAGELHKALDF 109
           +GV+F+SVLYACSH+GLVREG+EIF +MV DHGF+PLPEHY CMVDLLGRAG L KALDF
Sbjct: 454 TGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDF 513

Query: 108 FKKMPVEPGPAMWGALLSACKTHKNTELARLASDKL 1
            +KMPVEPGP +WGALL AC  HK+  LARLASDKL
Sbjct: 514 IRKMPVEPGPPVWGALLGACMIHKDANLARLASDKL 549


>ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  161 bits (408), Expect = 5e-38
 Identities = 74/96 (77%), Positives = 84/96 (87%)
 Frame = -1

Query: 288 SGVSFISVLYACSHSGLVREGEEIFYAMVQDHGFKPLPEHYVCMVDLLGRAGELHKALDF 109
           +GV+F+SVLYACSH+GLVREG+EIF +MV DHGF+PLPEHY CMVDLLGRAG L KALDF
Sbjct: 509 TGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDF 568

Query: 108 FKKMPVEPGPAMWGALLSACKTHKNTELARLASDKL 1
            +KMPVEPGP +WGALL AC  HK+  LARLASDKL
Sbjct: 569 IRKMPVEPGPPVWGALLGACMIHKDANLARLASDKL 604


>ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  147 bits (370), Expect = 1e-33
 Identities = 66/96 (68%), Positives = 82/96 (85%)
 Frame = -1

Query: 288 SGVSFISVLYACSHSGLVREGEEIFYAMVQDHGFKPLPEHYVCMVDLLGRAGELHKALDF 109
           S V+F+SVLYACSH+GLVREG+EIF+AMV  +  +PL EHY CMVD+LGRAG+L KAL+F
Sbjct: 506 SSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEF 565

Query: 108 FKKMPVEPGPAMWGALLSACKTHKNTELARLASDKL 1
            +KMPVEPGPA+WG LL AC  HK+T LAR+AS++L
Sbjct: 566 IRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERL 601


>ref|XP_002309359.1| predicted protein [Populus trichocarpa] gi|222855335|gb|EEE92882.1|
           predicted protein [Populus trichocarpa]
          Length = 605

 Score =  145 bits (367), Expect = 3e-33
 Identities = 65/96 (67%), Positives = 81/96 (84%)
 Frame = -1

Query: 288 SGVSFISVLYACSHSGLVREGEEIFYAMVQDHGFKPLPEHYVCMVDLLGRAGELHKALDF 109
           +G++F+SVLYACSH+GLV+EG+ IF+ MV D GF+PL EHY CMVD+LGRAG+L KAL+F
Sbjct: 333 TGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEF 392

Query: 108 FKKMPVEPGPAMWGALLSACKTHKNTELARLASDKL 1
            K MPVEPGP +WGALL AC  HK+T LA +AS+KL
Sbjct: 393 IKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKL 428


>ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  144 bits (364), Expect = 6e-33
 Identities = 62/96 (64%), Positives = 82/96 (85%)
 Frame = -1

Query: 288 SGVSFISVLYACSHSGLVREGEEIFYAMVQDHGFKPLPEHYVCMVDLLGRAGELHKALDF 109
           +GV+F+S+LYACSHSGLV EG EIF++M  ++GF+P+ EHY CMVD+LGRAG+L  AL+F
Sbjct: 515 TGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEF 574

Query: 108 FKKMPVEPGPAMWGALLSACKTHKNTELARLASDKL 1
            ++MP+EPGPA+WGALL AC  HKNTE+A +AS +L
Sbjct: 575 IERMPLEPGPAVWGALLGACMIHKNTEMANVASKRL 610


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