BLASTX nr result

ID: Atractylodes21_contig00028370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028370
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...   101   6e-20
ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    92   4e-17
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    88   8e-16

>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score =  101 bits (252), Expect = 6e-20
 Identities = 54/108 (50%), Positives = 76/108 (70%)
 Frame = +3

Query: 3   CILRSSPNLMELQIISRVPCKRPAPRAVTKKLMEEDYTNCFLNRLRFVTIVDFYGVPREL 182
           C+LRSSPN+ EL++++R P ++ +   +T    E+D+ N    +LR V IV   G+  EL
Sbjct: 319 CLLRSSPNVQELEMLAR-PEEQTSLGTITN-FWEDDHWNNLFGQLRLVRIVGISGIRCEL 376

Query: 183 NFINSLLANSPILERMTINPTFQKRGMKLVKELLRFRRASAHAEIIYM 326
           +F+N LL+NSP+LERMT+ P     G +L+KELLRFRRASA AEIIY+
Sbjct: 377 DFMNFLLSNSPVLERMTVKPASSDGGWELIKELLRFRRASARAEIIYL 424


>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 55/113 (48%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
 Frame = +3

Query: 3   CILRSSPNLMELQIISRVPCKRPAPRAVTKKLM-----EEDYTNCFLNRLRFVTIVDFYG 167
           C+LRSSPNL EL+I++R       P   T  L      E+ Y +C + +LR+V I    G
Sbjct: 320 CLLRSSPNLQELEILAR-------PEEQTVLLTHTYCWEDVYFSCPVMQLRYVKIDGISG 372

Query: 168 VPRELNFINSLLANSPILERMTINPTFQKRGMKLVKELLRFRRASAHAEIIYM 326
           +  EL+FIN LL +SP+LERMT+ P     G++L+KELLRFRRAS  AEIIY+
Sbjct: 373 IKPELDFINFLLLHSPVLERMTVKPV-ANVGLELMKELLRFRRASGQAEIIYL 424


>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/108 (44%), Positives = 70/108 (64%)
 Frame = +3

Query: 3   CILRSSPNLMELQIISRVPCKRPAPRAVTKKLMEEDYTNCFLNRLRFVTIVDFYGVPREL 182
           C+LRS PNL E++I++R P ++     VT    ++D+  C   +LR V IV   G+  EL
Sbjct: 398 CLLRSCPNLQEIEILAR-PEEQAVVGPVTD-FWDDDHWKCLFGQLRLVKIVGISGIRSEL 455

Query: 183 NFINSLLANSPILERMTINPTFQKRGMKLVKELLRFRRASAHAEIIYM 326
           + I  LL+NSP+LE+MTI P   + G +LVK+LL FRRAS  AE+ ++
Sbjct: 456 DCIKFLLSNSPVLEKMTIKPVSNEGGWELVKQLLHFRRASIQAEVFHL 503


>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/108 (44%), Positives = 66/108 (61%)
 Frame = +3

Query: 3   CILRSSPNLMELQIISRVPCKRPAPRAVTKKLMEEDYTNCFLNRLRFVTIVDFYGVPREL 182
           CIL+S PNL E++++ R   +  A          +D   C   +LR V IV   G+  EL
Sbjct: 309 CILKSCPNLQEIEMLGRP--EEQADVEPQTGFWGDDQWKCLFGQLRLVKIVGISGIRSEL 366

Query: 183 NFINSLLANSPILERMTINPTFQKRGMKLVKELLRFRRASAHAEIIYM 326
           + I  LL+NSP+LE+MT+ P   + G +LVKELLRFRRAS  AE+IY+
Sbjct: 367 DCIKFLLSNSPVLEQMTVKPASIEGGWELVKELLRFRRASIQAEVIYL 414


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 51/110 (46%), Positives = 70/110 (63%)
 Frame = +3

Query: 3   CILRSSPNLMELQIISRVPCKRPAPRAVTKKLMEEDYTNCFLNRLRFVTIVDFYGVPREL 182
           C+ RSSPNL EL+I++R P ++P P A      E+ Y +  + R+R V I    G+  EL
Sbjct: 320 CLFRSSPNLRELEILAR-PEEQPLPLAHHADCWEDVYLDWPVMRVRHVRIDGISGIKPEL 378

Query: 183 NFINSLLANSPILERMTINPTFQKRGMKLVKELLRFRRASAHAEIIYMGS 332
           +FI+ +L  SP+LERMT+ P       +LVKELLR RRAS  AE+IY+ S
Sbjct: 379 DFISFILLYSPVLERMTVKPAL-NASPELVKELLRLRRASGRAEVIYLDS 427


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