BLASTX nr result

ID: Atractylodes21_contig00028361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028361
         (1074 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB29946.1| F-box family protein-like [Solanum tuberosum]          377   e-102
ref|XP_002279098.1| PREDICTED: F-box protein At5g39250 isoform 3...   377   e-102
ref|XP_002526106.1| conserved hypothetical protein [Ricinus comm...   375   e-101
ref|XP_002306068.1| predicted protein [Populus trichocarpa] gi|2...   368   2e-99
ref|XP_002324105.1| predicted protein [Populus trichocarpa] gi|2...   365   8e-99

>gb|ABB29946.1| F-box family protein-like [Solanum tuberosum]
          Length = 250

 Score =  377 bits (968), Expect = e-102
 Identities = 170/250 (68%), Positives = 212/250 (84%), Gaps = 2/250 (0%)
 Frame = -3

Query: 898 MSSDEILKAVFPLLEGTDLAACTAVCKQWQNIAQDDYLWKCLCAKKWPSTCKNPRPP-IS 722
           M+ DEILKAVFP LEGT+LA C  VCKQW++IA+DDY WKCLC+KKWPS CK   PP ++
Sbjct: 1   MACDEILKAVFPFLEGTELATCMLVCKQWRDIARDDYFWKCLCSKKWPSICKRSSPPTVT 60

Query: 721 YHKIFKTFYKRENHRTLLPPRISLSDLEFYIDFWADGKLLFSEVVPGPVLRKGNWTPPPG 542
           Y+ +F+ F++R   RT+LPP++S SDLEFYID W + K++FS+VVPGPVL+KG W PPPG
Sbjct: 61  YYNLFQNFHRRPYRRTVLPPKLSFSDLEFYIDIWTEEKIIFSDVVPGPVLQKGIWIPPPG 120

Query: 541 ISSVMKYHLEGPDYKLTLPVKPRFAVPYTQTVTVSVLVARKDSNKVACIIHEAVFDYIDR 362
           I  V+K+HLEGP+YK+TLPV+PRF +P  QTV+VSVLV RKD+NKVACII +++FDYIDR
Sbjct: 121 ICDVLKFHLEGPEYKMTLPVEPRFTIPLCQTVSVSVLVGRKDTNKVACIIKKSLFDYIDR 180

Query: 361 STCRALAFDYLVF-SPAYPFVSGIRAWIALLFMEQGNDGDIDVFGLEMDFCDAANSEEEV 185
           +  RALA+DYL F SP   FVSG+RAWI+LLFM+ GN+G +DVFG+EMDFCDAANSE+EV
Sbjct: 181 TAYRALAYDYLDFSSPMCLFVSGVRAWISLLFMDHGNEGALDVFGIEMDFCDAANSEDEV 240

Query: 184 LWLLDMLDWK 155
           LWLLDML+WK
Sbjct: 241 LWLLDMLEWK 250


>ref|XP_002279098.1| PREDICTED: F-box protein At5g39250 isoform 3 [Vitis vinifera]
           gi|225451701|ref|XP_002279074.1| PREDICTED: F-box
           protein At5g39250 isoform 2 [Vitis vinifera]
           gi|225451703|ref|XP_002279063.1| PREDICTED: F-box
           protein At5g39250 isoform 1 [Vitis vinifera]
           gi|296082222|emb|CBI21227.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  377 bits (967), Expect = e-102
 Identities = 173/249 (69%), Positives = 210/249 (84%), Gaps = 1/249 (0%)
 Frame = -3

Query: 898 MSSDEILKAVFPLLEGTDLAACTAVCKQWQNIAQDDYLWKCLCAKKWPSTCKNPRPP-IS 722
           M+ +E+LKAVFPLLEG DLA+C  VCKQW++IAQDDY WKC+CAK+WPS CK P PP ++
Sbjct: 1   MAYEEVLKAVFPLLEGADLASCMLVCKQWRDIAQDDYFWKCVCAKRWPSICKRPSPPTVT 60

Query: 721 YHKIFKTFYKRENHRTLLPPRISLSDLEFYIDFWADGKLLFSEVVPGPVLRKGNWTPPPG 542
           Y+K+ +TFYKR++ R L PPR+S +DLEFYID W   + +FSEVVPGPVL+ G   PPPG
Sbjct: 61  YYKLCQTFYKRQHCRALPPPRLSFNDLEFYIDIWTGERSIFSEVVPGPVLQTGIVVPPPG 120

Query: 541 ISSVMKYHLEGPDYKLTLPVKPRFAVPYTQTVTVSVLVARKDSNKVACIIHEAVFDYIDR 362
           I  ++++HLEGP+YK+TL V+PRF VP   TV+VSVLV RKDS KVACII++++FDYIDR
Sbjct: 121 ICDMLRFHLEGPEYKMTLLVEPRFTVPLMATVSVSVLVGRKDSKKVACIINKSMFDYIDR 180

Query: 361 STCRALAFDYLVFSPAYPFVSGIRAWIALLFMEQGNDGDIDVFGLEMDFCDAANSEEEVL 182
           +  RALAFDYL FSP YPF+SGIRAWI+LLFME GN+G I+VFGLEMDFCDAANSE EVL
Sbjct: 181 TAYRALAFDYLDFSPIYPFISGIRAWISLLFMEDGNEGVINVFGLEMDFCDAANSEPEVL 240

Query: 181 WLLDMLDWK 155
           WLLDMLDWK
Sbjct: 241 WLLDMLDWK 249


>ref|XP_002526106.1| conserved hypothetical protein [Ricinus communis]
           gi|223534603|gb|EEF36300.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 249

 Score =  375 bits (963), Expect = e-101
 Identities = 171/249 (68%), Positives = 211/249 (84%), Gaps = 1/249 (0%)
 Frame = -3

Query: 898 MSSDEILKAVFPLLEGTDLAACTAVCKQWQNIAQDDYLWKCLCAKKWPSTCKNPRPP-IS 722
           MS DE+LKAVFPLL+G DLA+C  V KQW++ A+DDY WKCLCAK+WPS CK P PP ++
Sbjct: 1   MSYDEVLKAVFPLLDGVDLASCMVVSKQWRDTARDDYFWKCLCAKRWPSICKRPNPPTVT 60

Query: 721 YHKIFKTFYKRENHRTLLPPRISLSDLEFYIDFWADGKLLFSEVVPGPVLRKGNWTPPPG 542
           Y K+++TFYKR+N +TLLPPR+S  DLEF+ID W++ KL+FSEVVPGPVL  G   PPPG
Sbjct: 61  YCKLYQTFYKRQNRQTLLPPRLSFDDLEFFIDIWSEEKLIFSEVVPGPVLLGGIKVPPPG 120

Query: 541 ISSVMKYHLEGPDYKLTLPVKPRFAVPYTQTVTVSVLVARKDSNKVACIIHEAVFDYIDR 362
           I  ++++HLEGPDYK+TLPV+PR  +P +QTV+VSVLV RKD+NKVA +I+ +VFDYIDR
Sbjct: 121 ICDILRFHLEGPDYKMTLPVEPRVKIPLSQTVSVSVLVGRKDTNKVARVINRSVFDYIDR 180

Query: 361 STCRALAFDYLVFSPAYPFVSGIRAWIALLFMEQGNDGDIDVFGLEMDFCDAANSEEEVL 182
           +  R++AF+YL FSPA+PFV GIRAWI+LLFME GN+G IDVFG+EMDF DAANS EEVL
Sbjct: 181 TAYRSMAFEYLDFSPAHPFVPGIRAWISLLFMEDGNEGVIDVFGIEMDFRDAANSREEVL 240

Query: 181 WLLDMLDWK 155
           WLLDMLDWK
Sbjct: 241 WLLDMLDWK 249


>ref|XP_002306068.1| predicted protein [Populus trichocarpa] gi|222849032|gb|EEE86579.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  368 bits (944), Expect = 2e-99
 Identities = 168/249 (67%), Positives = 209/249 (83%), Gaps = 1/249 (0%)
 Frame = -3

Query: 898 MSSDEILKAVFPLLEGTDLAACTAVCKQWQNIAQDDYLWKCLCAKKWPSTCKNPRPP-IS 722
           MS +EILK VFPLLEG DLA+C AVCKQW+++AQDDY WKC+CAK+WPS CK   PP ++
Sbjct: 1   MSYEEILKVVFPLLEGADLASCMAVCKQWRDMAQDDYFWKCVCAKRWPSICKRSDPPTVT 60

Query: 721 YHKIFKTFYKRENHRTLLPPRISLSDLEFYIDFWADGKLLFSEVVPGPVLRKGNWTPPPG 542
           Y+K+++TFYKR++ + LLPPR+S  +LEF+ID W D KL+FSEVVPGPVL  G  +PPPG
Sbjct: 61  YYKLYQTFYKRQHRQILLPPRLSFDNLEFFIDIWTDDKLIFSEVVPGPVLHTGIKSPPPG 120

Query: 541 ISSVMKYHLEGPDYKLTLPVKPRFAVPYTQTVTVSVLVARKDSNKVACIIHEAVFDYIDR 362
           I   +++ LEGPD K+TLPV+PRF VP  +TV+VSVLV RKDSN+VACII+++VFDYIDR
Sbjct: 121 ICDRLRFQLEGPDCKMTLPVEPRFKVPLGETVSVSVLVGRKDSNRVACIINKSVFDYIDR 180

Query: 361 STCRALAFDYLVFSPAYPFVSGIRAWIALLFMEQGNDGDIDVFGLEMDFCDAANSEEEVL 182
           ++ RA+AFDYL  SPA+PFV GIRAWI+LLFM+  ND  IDVFG+EMDFCDAA S +EVL
Sbjct: 181 TSYRAMAFDYLGLSPAHPFVPGIRAWISLLFMDDRNDSVIDVFGIEMDFCDAAKSRDEVL 240

Query: 181 WLLDMLDWK 155
           WLLD+LDWK
Sbjct: 241 WLLDILDWK 249


>ref|XP_002324105.1| predicted protein [Populus trichocarpa] gi|222867107|gb|EEF04238.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  365 bits (938), Expect = 8e-99
 Identities = 168/249 (67%), Positives = 206/249 (82%), Gaps = 1/249 (0%)
 Frame = -3

Query: 898 MSSDEILKAVFPLLEGTDLAACTAVCKQWQNIAQDDYLWKCLCAKKWPSTCKNPRPP-IS 722
           MS  EILKAVFPLLEG DLA+C AVCKQW++IAQDDYLWKCLCAK+WPS CK P PP ++
Sbjct: 1   MSYVEILKAVFPLLEGADLASCVAVCKQWRDIAQDDYLWKCLCAKRWPSICKRPNPPTVT 60

Query: 721 YHKIFKTFYKRENHRTLLPPRISLSDLEFYIDFWADGKLLFSEVVPGPVLRKGNWTPPPG 542
           Y+K+++TFYK +  +TLLPPR+S  +LEF+ID W   KL+FSEVV GPVL+ G   PPP 
Sbjct: 61  YYKLYQTFYKHQRQQTLLPPRLSFDNLEFFIDIWTGDKLIFSEVVSGPVLQTGIKCPPPR 120

Query: 541 ISSVMKYHLEGPDYKLTLPVKPRFAVPYTQTVTVSVLVARKDSNKVACIIHEAVFDYIDR 362
           I   + +HLEGPDYK+ LPV+PRF  P  +TV+VSVLV RKD+NKVACII+++VFDYIDR
Sbjct: 121 ICDRLGFHLEGPDYKMILPVEPRFKAPLGETVSVSVLVGRKDNNKVACIINKSVFDYIDR 180

Query: 361 STCRALAFDYLVFSPAYPFVSGIRAWIALLFMEQGNDGDIDVFGLEMDFCDAANSEEEVL 182
           +  RA+AFDYL FSPA+PFV GIRAWI+LLF++  ND  +DVFG+E+DFCDAA S +EVL
Sbjct: 181 TAYRAMAFDYLGFSPAHPFVPGIRAWISLLFVDDKNDSVLDVFGIEIDFCDAAKSRDEVL 240

Query: 181 WLLDMLDWK 155
           WLLD+LDWK
Sbjct: 241 WLLDILDWK 249


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