BLASTX nr result

ID: Atractylodes21_contig00028350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028350
         (1583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272768.1| PREDICTED: transcription elongation factor A...   432   e-118
ref|XP_004138392.1| PREDICTED: transcription elongation factor A...   429   e-117
ref|XP_002528699.1| transcription elongation factor s-II, putati...   419   e-114
emb|CBI18026.3| unnamed protein product [Vitis vinifera]              409   e-111
ref|XP_003523285.1| PREDICTED: putative transcription elongation...   394   e-107

>ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
            vinifera]
          Length = 367

 Score =  432 bits (1110), Expect = e-118
 Identities = 225/375 (60%), Positives = 270/375 (72%), Gaps = 7/375 (1%)
 Frame = -2

Query: 1414 METELIELFEXXXXXXXXXXXXXXXXDSLPEEDRCLDALKVLKKFPVNYQILVSTQVGKR 1235
            ME EL+ELFE                +  PE  RC+DALK LK FPV Y+ L STQVGKR
Sbjct: 1    MERELVELFESAKKAADAAATDGVSSNG-PEVGRCVDALKQLKSFPVTYEALASTQVGKR 59

Query: 1234 LRQLTKHPRKKIQSLASELVEIWKGVIVEETLKNKKNGNLDIKESPKPEHG------VEM 1073
            LR LTKHP+ KIQSLAS+L+E+WK V+++ET +NKKNG LD   S K E        VEM
Sbjct: 60   LRHLTKHPKGKIQSLASDLLEMWKKVVIDET-RNKKNGGLDNNGSAKAEVSKTETVKVEM 118

Query: 1072 SEKKVQRINSFKAEKVSKMEGVKVEK-NGDCGTLISSEKKVNGVKVEKREHEKAMKEDKP 896
            + K        K EK SK+E VK+EK +    T   S  +   +KVEKR     + E K 
Sbjct: 119  AHKA----GGVKVEKASKVETVKIEKFDRGSSTKPGSVSRSETIKVEKRVEN--VDERKQ 172

Query: 895  TPEARKPTTNAVGPPKLTSLVYCKDPVRDKIRELLAEALCKVPGEAEEESRDEVNGCDPY 716
                +KP   + GPPKLT+++ C D +RDK+RELLAEAL KV  EA+E+ +DEVN CDP 
Sbjct: 173  FSSVKKPPQASNGPPKLTAMIKCNDALRDKVRELLAEALFKVASEADEDIKDEVNACDPI 232

Query: 715  RVAVSVESAMFEKWGRSNGAQKFKYRSIMFNVKDPKNPDFRRKILLGHMTPERILELTPE 536
            RVAVSVES MFEK GRSNG QKFKYRSIMFN+KDP NPD RRK+LLG + P+R++ ++PE
Sbjct: 233  RVAVSVESVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPE 292

Query: 535  EMASNERQMQNVKIKEKALFECERGGPPKATTDQFRCGRCGKRQCTYYQLQTRSADEPMT 356
            EMASN+RQ +N +IKEKALF+CERGGPPKATTDQF+CGRCG+R+ TYYQLQTRSADEPMT
Sbjct: 293  EMASNQRQRENSQIKEKALFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMT 352

Query: 355  TFVTCVNCDNHWKFC 311
            TFVTCVNC+NHWKFC
Sbjct: 353  TFVTCVNCNNHWKFC 367


>ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like [Cucumis
            sativus]
          Length = 369

 Score =  429 bits (1103), Expect = e-117
 Identities = 220/375 (58%), Positives = 274/375 (73%), Gaps = 7/375 (1%)
 Frame = -2

Query: 1414 METELIELFEXXXXXXXXXXXXXXXXDSLPEEDRCLDALKVLKKFPVNYQILVSTQVGKR 1235
            ME EL+ELFE                 +  EE RCLDAL+ LKKFPV YQILVSTQVGKR
Sbjct: 1    MENELVELFEAAKKAADAAAAPSNDGGA--EESRCLDALRQLKKFPVTYQILVSTQVGKR 58

Query: 1234 LRQLTKHPRKKIQSLASELVEIWKGVIVEETLKNKKNGNLDIKESPK--PEHGVEMSEKK 1061
            LR LTKHP+KKIQ  AS+L+E+WK ++++ET KNKKNGN   K+SPK        +  +K
Sbjct: 59   LRHLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSAESVKVEK 118

Query: 1060 VQRINSFKAEKVSKMEGVKVEKNGDCGTLISSEKKV-----NGVKVEKREHEKAMKEDKP 896
             Q+ +S K E+VSK+E  + ++NG   ++  S+ +      N VKVEK +    +K ++ 
Sbjct: 119  FQKSSSMKVERVSKVE--QFDRNGATSSVKYSKSESVVSERNSVKVEKTD--SMVKVERV 174

Query: 895  TPEARKPTTNAVGPPKLTSLVYCKDPVRDKIRELLAEALCKVPGEAEEESRDEVNGCDPY 716
              E +KP++ A  PPKLTS++  KD  RDKIRELL EA  KVPGEA+EE  DEVN  DP 
Sbjct: 175  VKEEKKPSSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPI 234

Query: 715  RVAVSVESAMFEKWGRSNGAQKFKYRSIMFNVKDPKNPDFRRKILLGHMTPERILELTPE 536
            RVAVSVES MFE WG S GAQK KYRSIMFN+KDPKNPDFRRK+LLG + PER++ ++  
Sbjct: 235  RVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTA 294

Query: 535  EMASNERQMQNVKIKEKALFECERGGPPKATTDQFRCGRCGKRQCTYYQLQTRSADEPMT 356
            +MAS++R+ +N +I +KALF+CERGG PKATTDQF+CGRCG+R+ TYYQLQTRSADEPMT
Sbjct: 295  DMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMT 354

Query: 355  TFVTCVNCDNHWKFC 311
            TFVTCVNC+NHWKFC
Sbjct: 355  TFVTCVNCNNHWKFC 369


>ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
            gi|223531871|gb|EEF33688.1| transcription elongation
            factor s-II, putative [Ricinus communis]
          Length = 342

 Score =  419 bits (1077), Expect = e-114
 Identities = 219/368 (59%), Positives = 266/368 (72%)
 Frame = -2

Query: 1414 METELIELFEXXXXXXXXXXXXXXXXDSLPEEDRCLDALKVLKKFPVNYQILVSTQVGKR 1235
            ME EL+ELFE                +  PE  RC+DALK LK FP++Y ILVS+QVGKR
Sbjct: 1    MERELVELFEAAKKAADAAASDGVSSNG-PEVVRCVDALKQLKIFPISYDILVSSQVGKR 59

Query: 1234 LRQLTKHPRKKIQSLASELVEIWKGVIVEETLKNKKNGNLDIKESPKPEHGVEMSEKKVQ 1055
            LR LTKHPR+KIQ++AS+L+E+WK ++++ET + KKNG +D K S K E         V 
Sbjct: 60   LRPLTKHPREKIQTVASDLLEMWKKIVIDETTR-KKNGTVDNKSSVKAE---------VS 109

Query: 1054 RINSFKAEKVSKMEGVKVEKNGDCGTLISSEKKVNGVKVEKREHEKAMKEDKPTPEARKP 875
            ++ + K EKV K   VKVEK       I  E+ V   KVEK+  EK    D      +KP
Sbjct: 110  KVETIKVEKVQKASTVKVEK-------IDRERTV---KVEKKSEEKQQAID-----VKKP 154

Query: 874  TTNAVGPPKLTSLVYCKDPVRDKIRELLAEALCKVPGEAEEESRDEVNGCDPYRVAVSVE 695
            +  +V PPKLT++V C D +RDKIRELL EAL KV  EA E+ RDE++ CDP RVAVSVE
Sbjct: 155  SQASVTPPKLTAIVKCNDALRDKIRELLVEALSKVVSEANEDGRDEISKCDPIRVAVSVE 214

Query: 694  SAMFEKWGRSNGAQKFKYRSIMFNVKDPKNPDFRRKILLGHMTPERILELTPEEMASNER 515
            SAMFEK GRSNGAQKFKYRSIMFN+KDP NPD RRK+LLG + PER++ +TPEEMAS ER
Sbjct: 215  SAMFEKMGRSNGAQKFKYRSIMFNLKDPNNPDLRRKVLLGEVKPERLISMTPEEMASKER 274

Query: 514  QMQNVKIKEKALFECERGGPPKATTDQFRCGRCGKRQCTYYQLQTRSADEPMTTFVTCVN 335
            Q +  +IKEKALF+CERGGP KATTDQF+C RCG+R+CTYYQ+QTRSADEPMTT+VTCVN
Sbjct: 275  QEEINQIKEKALFDCERGGPAKATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVN 334

Query: 334  CDNHWKFC 311
            C+ HWKFC
Sbjct: 335  CNKHWKFC 342


>emb|CBI18026.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  409 bits (1050), Expect = e-111
 Identities = 214/368 (58%), Positives = 254/368 (69%)
 Frame = -2

Query: 1414 METELIELFEXXXXXXXXXXXXXXXXDSLPEEDRCLDALKVLKKFPVNYQILVSTQVGKR 1235
            ME EL+ELFE                +  PE  RC+DALK LK FPV Y+ L STQVGKR
Sbjct: 1    MERELVELFESAKKAADAAATDGVSSNG-PEVGRCVDALKQLKSFPVTYEALASTQVGKR 59

Query: 1234 LRQLTKHPRKKIQSLASELVEIWKGVIVEETLKNKKNGNLDIKESPKPEHGVEMSEKKVQ 1055
            LR LTKHP+ KIQSLAS+L+E+WK V+++ET +NKKNG LD                   
Sbjct: 60   LRHLTKHPKGKIQSLASDLLEMWKKVVIDET-RNKKNGGLDNN----------------- 101

Query: 1054 RINSFKAEKVSKMEGVKVEKNGDCGTLISSEKKVNGVKVEKREHEKAMKEDKPTPEARKP 875
               S KAEK SK+E V              EK+V  V            E K     +KP
Sbjct: 102  --GSAKAEKASKVETV--------------EKRVENVD-----------ERKQFSSVKKP 134

Query: 874  TTNAVGPPKLTSLVYCKDPVRDKIRELLAEALCKVPGEAEEESRDEVNGCDPYRVAVSVE 695
               + GPPKLT+++ C D +RDK+RELLAEAL KV  EA+E+ +DEVN CDP RVAVSVE
Sbjct: 135  PQASNGPPKLTAMIKCNDALRDKVRELLAEALFKVASEADEDIKDEVNACDPIRVAVSVE 194

Query: 694  SAMFEKWGRSNGAQKFKYRSIMFNVKDPKNPDFRRKILLGHMTPERILELTPEEMASNER 515
            S MFEK GRSNG QKFKYRSIMFN+KDP NPD RRK+LLG + P+R++ ++PEEMASN+R
Sbjct: 195  SVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMASNQR 254

Query: 514  QMQNVKIKEKALFECERGGPPKATTDQFRCGRCGKRQCTYYQLQTRSADEPMTTFVTCVN 335
            Q +N +IKEKALF+CERGGPPKATTDQF+CGRCG+R+ TYYQLQTRSADEPMTTFVTCVN
Sbjct: 255  QRENSQIKEKALFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVN 314

Query: 334  CDNHWKFC 311
            C+NHWKFC
Sbjct: 315  CNNHWKFC 322


>ref|XP_003523285.1| PREDICTED: putative transcription elongation factor S-II-like
            [Glycine max]
          Length = 368

 Score =  394 bits (1012), Expect = e-107
 Identities = 204/375 (54%), Positives = 263/375 (70%), Gaps = 7/375 (1%)
 Frame = -2

Query: 1414 METELIELFEXXXXXXXXXXXXXXXXDSLPEEDRCLDALKVLKKFPVNYQILVSTQVGKR 1235
            ME EL+EL+E                    EE RC+DAL+ LKKFPVNY+ILV+TQVGK 
Sbjct: 1    MEKELVELYEAAKKAADAAISGDGKH----EESRCIDALEQLKKFPVNYKILVNTQVGKH 56

Query: 1234 LRQLTKHPRKKIQSLASELVEIWKGVIVEETLKNKKNGNLDIKESPKPEHGVEMSEKKVQ 1055
            L+ LTKHPR KI++ A +L+EIWKG+I++ET KNK  G+    ES    +G +    K+Q
Sbjct: 57   LKVLTKHPRLKIKAFAIDLIEIWKGIIIKETSKNKNGGSDSKVESA---NGEKSKAGKMQ 113

Query: 1054 RINSFKAEKVSKMEGVKVEKNGDCGTLISSEKKV-NGVKVEKREH------EKAMKEDKP 896
            +  S K EK   ++  K+++NG   +   + KKV N VK EK +       EK  KE+KP
Sbjct: 114  KSPSVKVEKGETVKVEKIDRNGTTKSSSENMKKVQNDVKNEKTDRSASVKVEKIAKEEKP 173

Query: 895  TPEARKPTTNAVGPPKLTSLVYCKDPVRDKIRELLAEALCKVPGEAEEESRDEVNGCDPY 716
               A+K ++++  PPKL +++   D  RDKIRE+L EAL KV GEA+E+  D VN  DP 
Sbjct: 174  VSGAKKMSSSSAAPPKLKTMIKSNDATRDKIREILHEALSKVTGEADEDLVDVVNNSDPI 233

Query: 715  RVAVSVESAMFEKWGRSNGAQKFKYRSIMFNVKDPKNPDFRRKILLGHMTPERILELTPE 536
            RVAV+VES +FEKWG SNGAQK KYRS+MFN+KD  NPDFRRK+LLG + PE+++ ++  
Sbjct: 234  RVAVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTA 293

Query: 535  EMASNERQMQNVKIKEKALFECERGGPPKATTDQFRCGRCGKRQCTYYQLQTRSADEPMT 356
            EMAS +R+ +  KI EKALFECERGGPPKATTDQF+CGRCG+R+ TYYQ+QTRSADEPMT
Sbjct: 294  EMASEQRKQEYQKITEKALFECERGGPPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMT 353

Query: 355  TFVTCVNCDNHWKFC 311
            T+VTCV C+N WKFC
Sbjct: 354  TYVTCVVCNNRWKFC 368


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