BLASTX nr result

ID: Atractylodes21_contig00028349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028349
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD03673.1| resistance protein candidate RGC20 [Lactuca sativa]    111   7e-23
gb|AAR02572.1| resistance protein candidate RGC2 [Lactuca sativa]      97   1e-18
gb|AAD03156.1| resistance protein candidate RGC2B [Lactuca sativa]     97   1e-18
gb|AAQ72577.1| resistance protein RGC2 [Lactuca sativa]                96   2e-18
gb|AAD03157.1| resistance protein candidate RGC2S [Lactuca sativa]     96   3e-18

>gb|AAD03673.1| resistance protein candidate RGC20 [Lactuca sativa]
          Length = 1758

 Score =  111 bits (277), Expect = 7e-23
 Identities = 65/121 (53%), Positives = 75/121 (61%), Gaps = 5/121 (4%)
 Frame = -2

Query: 353  FPRLDILYLNCLPKLKRIGGGGTIHDQFQFSQEDITSWSLCQYSRKIDLLRCHALSSAIP 174
            FP LD L L  L  LK IGGGG   D+F+FSQ  +  WSLCQYSR+I++  CHALSS IP
Sbjct: 1247 FPHLDSLTLFRLDNLKCIGGGGAFLDRFKFSQAGVVCWSLCQYSREIEIRSCHALSSVIP 1306

Query: 173  FNAAGQMQKLEKLTI*DCDSLVEVFETQG-----TNNSGCCSTNFDEGSDTTLAIPRPKN 9
              A+GQMQKL  L I  C  + EVFETQG      N SGC     DEG+D    IPR  +
Sbjct: 1307 CYASGQMQKLRVLKIERCKGVKEVFETQGICSNKNNKSGC-----DEGND---EIPRVNS 1358

Query: 8    I 6
            I
Sbjct: 1359 I 1359


>gb|AAR02572.1| resistance protein candidate RGC2 [Lactuca sativa]
          Length = 1923

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 65/135 (48%), Positives = 75/135 (55%), Gaps = 20/135 (14%)
 Frame = -2

Query: 353  FPRLDILYLNCLPKLKRIGG-----GGTIH-------------DQFQFSQEDITSWSLCQ 228
            FP L+ L LN L  LK IGG     GG                DQF+ SQ    SW+LCQ
Sbjct: 1250 FPCLNSLSLNSLDSLKCIGGSVCANGGNNEISSNNSTTTTAFVDQFKSSQVGDVSWALCQ 1309

Query: 227  YSRKIDLLRCHALSSAIPFNAAGQMQKLEKLTI*DCDSLVEVFETQGTNNS--GCCSTNF 54
            YSR+I +  C+ LSS IP   A QMQKLEKLTI +C  + E+FETQG NN+  GC   NF
Sbjct: 1310 YSREITIRMCYKLSSLIPSYTARQMQKLEKLTIENCGGMKELFETQGINNNNIGCEEGNF 1369

Query: 53   DEGSDTTLAIPRPKN 9
            D     T AIPR  N
Sbjct: 1370 D-----TPAIPRRNN 1379


>gb|AAD03156.1| resistance protein candidate RGC2B [Lactuca sativa]
          Length = 1810

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 60/133 (45%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
 Frame = -2

Query: 353  FPRLDILYLNCLPKLKRIGGGGT------------------IHDQFQFSQEDITSWSLCQ 228
            FP LD L L+ L  LK IGGGG                   + DQF+ S+    SWSLCQ
Sbjct: 1236 FPSLDSLTLSFLENLKCIGGGGAKDEGSNEISFNNTTATTAVLDQFELSEAGGVSWSLCQ 1295

Query: 227  YSRKIDLLRCHALSSAIPFNAAGQMQKLEKLTI*DCDSLVEVFETQGTNNSGCCSTNFDE 48
            Y+R+I+++ C+ALSS IP  AAGQMQKL+ L I  CD + EVFETQ     G  S   +E
Sbjct: 1296 YAREIEIVGCYALSSVIPCYAAGQMQKLQVLRIESCDGMKEVFETQ----LGTSSNKNNE 1351

Query: 47   GSDTTLAIPRPKN 9
             S     IPR  N
Sbjct: 1352 KSGCEEGIPRVNN 1364


>gb|AAQ72577.1| resistance protein RGC2 [Lactuca sativa]
          Length = 747

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 60/129 (46%), Positives = 71/129 (55%), Gaps = 14/129 (10%)
 Frame = -2

Query: 353 FPRLDILYLNCLPKLKRIGGGG--------------TIHDQFQFSQEDITSWSLCQYSRK 216
           FP LD L L  + KLK IGGGG              T  DQF+ S+     WSLCQYSR+
Sbjct: 174 FPHLDSLTLRYMYKLKCIGGGGAKDGSNEISFNNTTTTTDQFELSEAGGVCWSLCQYSRE 233

Query: 215 IDLLRCHALSSAIPFNAAGQMQKLEKLTI*DCDSLVEVFETQGTNNSGCCSTNFDEGSDT 36
           I++ RC ALSS IP  AAGQMQKL+ L I  C+ + E+FETQ     G  S   +E S  
Sbjct: 234 IEIYRCDALSSVIPCYAAGQMQKLQVLKIGSCNGMNELFETQ----LGMSSNKNNEKSGC 289

Query: 35  TLAIPRPKN 9
              IPR  N
Sbjct: 290 EEGIPRVNN 298


>gb|AAD03157.1| resistance protein candidate RGC2S [Lactuca sativa]
          Length = 1813

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 59/134 (44%), Positives = 75/134 (55%), Gaps = 19/134 (14%)
 Frame = -2

Query: 353  FPRLDILYLNCLPKLKRIGGGGT------------------IHDQFQFSQEDITSWSLCQ 228
            FP LD L L  L  LK IGGGG                   + DQF+ S+    SWSLCQ
Sbjct: 1235 FPHLDSLTLRLLENLKCIGGGGAKDEGSNEISFNNTTATTAVLDQFELSEAGGVSWSLCQ 1294

Query: 227  YSRKIDLLRCHALSSAIPFNAAGQMQKLEKLTI*DCDSLVEVFETQ-GTNNSGCCSTNFD 51
            Y+R+I++ +C+ LSS IP  AAGQMQKL+ L +  CD + EVFETQ GT+++       D
Sbjct: 1295 YAREIEISKCNVLSSVIPCYAAGQMQKLQVLRVTGCDGMKEVFETQLGTSSNKNRKGGGD 1354

Query: 50   EGSDTTLAIPRPKN 9
            EG+     IPR  N
Sbjct: 1355 EGNG---GIPRVNN 1365


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