BLASTX nr result

ID: Atractylodes21_contig00028345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028345
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH25579.1| reverse transcriptase [Trichosanthes cucumerina]       66   3e-09
emb|CAJ65846.1| putative reverse transcriptase [Cucumis melo]          64   1e-08
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]    63   3e-08
emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera]    62   4e-08
gb|AAB36266.1| retrotransposon peptide {Ty1-copia retrotransposo...    62   6e-08

>emb|CAH25579.1| reverse transcriptase [Trichosanthes cucumerina]
          Length = 79

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/46 (67%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +3

Query: 117 MVCKLNKSLYGLRHASIQWYAKFSTFLLADGFVQSRSDYSL-LQRH 251
           +VCKL+KS+YGL+ AS QW+AKFSTFL++ GF QS++DYSL LQ H
Sbjct: 25  LVCKLHKSIYGLKQASRQWFAKFSTFLISLGFAQSKADYSLFLQGH 70


>emb|CAJ65846.1| putative reverse transcriptase [Cucumis melo]
          Length = 79

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/43 (65%), Positives = 37/43 (86%)
 Frame = +3

Query: 120 VCKLNKSLYGLRHASIQWYAKFSTFLLADGFVQSRSDYSLLQR 248
           VCKL+KS+YGL+ AS QW+AKFS+FL++ GF QS++DYSL  R
Sbjct: 26  VCKLHKSIYGLKQASRQWFAKFSSFLISQGFQQSKADYSLFIR 68


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/47 (59%), Positives = 38/47 (80%)
 Frame = +3

Query: 108  EASMVCKLNKSLYGLRHASIQWYAKFSTFLLADGFVQSRSDYSLLQR 248
            E ++VC+L+KSLYGL+ AS QW++KFS  + A G+VQSR+DYSL  R
Sbjct: 1145 EENLVCRLHKSLYGLKQASRQWFSKFSKAIQAAGYVQSRADYSLFTR 1191


>emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera]
          Length = 1240

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = +3

Query: 111 ASMVCKLNKSLYGLRHASIQWYAKFSTFLLADGFVQSRSDYSL 239
           ++ VCKL+KS+YGLR AS QW+AKFS  L+++GF QS SDYSL
Sbjct: 850 SNTVCKLHKSIYGLRQASRQWFAKFSGVLISEGFQQSHSDYSL 892


>gb|AAB36266.1| retrotransposon peptide {Ty1-copia retrotransposon element, clone
           Sat 30} [Vicia sativa, leaves, Peptide Transposon
           Partial, 75 aa]
          Length = 75

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/44 (63%), Positives = 36/44 (81%)
 Frame = +3

Query: 108 EASMVCKLNKSLYGLRHASIQWYAKFSTFLLADGFVQSRSDYSL 239
           +AS VCKL KSLYGL+ AS QWY+K STFL++ G+ QS +D+SL
Sbjct: 18  DASKVCKLQKSLYGLKQASRQWYSKLSTFLISLGYSQSHADHSL 61


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