BLASTX nr result

ID: Atractylodes21_contig00028306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028306
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT08958.1| CC-NBS-LRR-like protein [Helianthus annuus]             65   4e-09
gb|AAT08955.1| CC-NBS-LRR [Helianthus annuus]                          65   4e-09
gb|ACF98012.1| NBS-LRR resistance-like protein RGC260 [Helianthu...    60   1e-07
gb|ACF98011.1| NBS-LRR resistance-like protein RGC260, partial [...    60   1e-07
gb|ADX86907.1| NBS-LRR protein [Helianthus annuus]                     60   2e-07

>gb|AAT08958.1| CC-NBS-LRR-like protein [Helianthus annuus]
          Length = 479

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/49 (61%), Positives = 33/49 (67%)
 Frame = +1

Query: 4   CPKLKDLPETLLPSLSCLGVWSCPKLKKRCGDRKGDYWPIISEIPSARI 150
           CPK+ DLPETLLPSL  L +  CPKLK+RC  R   YWP IS IP   I
Sbjct: 429 CPKVNDLPETLLPSLLSLRIRGCPKLKERCEGRGSHYWPRISHIPCIEI 477


>gb|AAT08955.1| CC-NBS-LRR [Helianthus annuus]
          Length = 1279

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/49 (61%), Positives = 33/49 (67%)
 Frame = +1

Query: 4    CPKLKDLPETLLPSLSCLGVWSCPKLKKRCGDRKGDYWPIISEIPSARI 150
            CPK+ DLPETLLPSL  L +  CPKLK+RC  R   YWP IS IP   I
Sbjct: 1229 CPKVNDLPETLLPSLLSLRIRGCPKLKERCEGRGSHYWPRISHIPCIEI 1277


>gb|ACF98012.1| NBS-LRR resistance-like protein RGC260 [Helianthus annuus]
          Length = 1339

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
 Frame = +1

Query: 4    CPKLKDLPETLLPSLSCLGV-WSCPKLKKRCGDRKGDYWPIISEIPSARI 150
            CPK+ DLPETLLPSL  L +   CPKLK+RC  ++G YWP+I  IP  RI
Sbjct: 1291 CPKMMDLPETLLPSLLSLTILGDCPKLKERC-SKRGCYWPLIWHIPYIRI 1339


>gb|ACF98011.1| NBS-LRR resistance-like protein RGC260, partial [Helianthus annuus]
          Length = 83

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
 Frame = +1

Query: 4   CPKLKDLPETLLPSLSCLGV-WSCPKLKKRCGDRKGDYWPIISEIPSARI 150
           CPK+ DLPETLLPSL  L +   CPKLK+RC  ++G YWP+I  IP  RI
Sbjct: 35  CPKMMDLPETLLPSLLSLTILGDCPKLKERC-SKRGCYWPLIWHIPYIRI 83


>gb|ADX86907.1| NBS-LRR protein [Helianthus annuus]
          Length = 1330

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
 Frame = +1

Query: 4    CPKLKDLPETLLPSLSCLGVW-SCPKLKKRCGDRKGDYWPIISEIPSARI 150
            CPK+ DLPETLLPSL  L ++  CPKLK+RC  ++G YWP I  IP  RI
Sbjct: 1282 CPKMMDLPETLLPSLLSLTIFGDCPKLKERC-SKRGCYWPHIWHIPYIRI 1330


Top