BLASTX nr result

ID: Atractylodes21_contig00028268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028268
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284210.1| PREDICTED: PRA1 family protein D-like [Vitis...    84   2e-14
emb|CAN60779.1| hypothetical protein VITISV_032147 [Vitis vinifera]    84   2e-14
ref|XP_002892203.1| hypothetical protein ARALYDRAFT_470402 [Arab...    65   8e-09
ref|NP_563704.1| PRA1 family protein D [Arabidopsis thaliana] gi...    65   1e-08
ref|XP_002517019.1| conserved hypothetical protein [Ricinus comm...    65   1e-08

>ref|XP_002284210.1| PREDICTED: PRA1 family protein D-like [Vitis vinifera]
          Length = 191

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 47/136 (34%), Positives = 67/136 (49%)
 Frame = -3

Query: 426 RIQKNLYAFRANYXXXXXXXXXXXXXXXXXXXXXXXXXIVAWIYLVFARDEPLVVFDFEI 247
           RI+++L  FR NY                          VAW++L F RD+P+++F+  +
Sbjct: 59  RIKRSLAYFRVNYTLIVLLVLFVSLLWHPISMIVFLVVFVAWLFLYFLRDDPVLIFNRIV 118

Query: 246 GGRXXXXXXXXXXXXXXXXXXVWWNIFLSVLISALVVCLHAILRTPDDADDMESPYGALL 67
             R                  VW N+F+S++I + +VCLH   R  D+ DD ESPYGALL
Sbjct: 119 DDRVVLVGVAAVTIVALVLTHVWLNVFVSLVIGSFLVCLHGAFRASDNLDDQESPYGALL 178

Query: 66  SVVDEDGPARGPYTLV 19
           +VVD     RG Y+LV
Sbjct: 179 TVVDS---PRGSYSLV 191


>emb|CAN60779.1| hypothetical protein VITISV_032147 [Vitis vinifera]
          Length = 160

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 47/136 (34%), Positives = 67/136 (49%)
 Frame = -3

Query: 426 RIQKNLYAFRANYXXXXXXXXXXXXXXXXXXXXXXXXXIVAWIYLVFARDEPLVVFDFEI 247
           RI+++L  FR NY                          VAW++L F RD+P+++F+  +
Sbjct: 28  RIKRSLAYFRVNYTLIVLLVLFVSLLWHPISMIVFLVVFVAWLFLYFLRDDPVLIFNRIV 87

Query: 246 GGRXXXXXXXXXXXXXXXXXXVWWNIFLSVLISALVVCLHAILRTPDDADDMESPYGALL 67
             R                  VW N+F+S++I + +VCLH   R  D+ DD ESPYGALL
Sbjct: 88  DDRVVLVGVAAVTIVALVLTHVWLNVFVSLVIGSFLVCLHGAFRASDNLDDQESPYGALL 147

Query: 66  SVVDEDGPARGPYTLV 19
           +VVD     RG Y+LV
Sbjct: 148 TVVDS---PRGSYSLV 160


>ref|XP_002892203.1| hypothetical protein ARALYDRAFT_470402 [Arabidopsis lyrata subsp.
           lyrata] gi|297338045|gb|EFH68462.1| hypothetical protein
           ARALYDRAFT_470402 [Arabidopsis lyrata subsp. lyrata]
          Length = 177

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 52/169 (30%), Positives = 65/169 (38%), Gaps = 2/169 (1%)
 Frame = -3

Query: 525 TASQIRHSIRPWXXXXXXXXXXXXXXXXXXXXLRIQKNLYAFRANYXXXXXXXXXXXXXX 346
           TA  I  + RPW                     R+ +NL  FR NY              
Sbjct: 12  TAQSITGAARPWGDFLDLSAFSVPSSVADATT-RVTQNLTHFRINYSIILSILLGLTLIT 70

Query: 345 XXXXXXXXXXXIVAWIYLVFARDEPLVVFDFEIGGRXXXXXXXXXXXXXXXXXXVWWNIF 166
                       +AW +L FAR+EPL +F F I                     VW    
Sbjct: 71  RPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIGSLVTTGVWLRAL 130

Query: 165 LSVLISALVVCLHAILRTPDD--ADDMESPYGALLSVVDEDGPARGPYT 25
            +V    LV+ LHA LR  DD  +DD+ESPYG +LS    DG ARG Y+
Sbjct: 131 TTVGFGVLVLILHAALRGTDDLVSDDLESPYGPMLST---DG-ARGDYS 175


>ref|NP_563704.1| PRA1 family protein D [Arabidopsis thaliana]
           gi|75101252|sp|P93829.1|PRA1D_ARATH RecName: Full=PRA1
           family protein D; Short=AtPRA1.D; AltName: Full=CAMV
           MOVEMENT PROTEIN-INTERACTING PROTEIN 7; AltName:
           Full=Prenylated Rab acceptor 5
           gi|13878041|gb|AAK44098.1|AF370283_1 unknown protein
           [Arabidopsis thaliana] gi|1903367|gb|AAB70450.1| ESTs
           gb|N65789,gb|T04628 come from this gene [Arabidopsis
           thaliana] gi|17104669|gb|AAL34223.1| unknown protein
           [Arabidopsis thaliana] gi|18072831|emb|CAC80648.1|
           prenylated Rab receptor 5 [Arabidopsis thaliana]
           gi|332189554|gb|AEE27675.1| PRA1 family protein D
           [Arabidopsis thaliana]
          Length = 182

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 52/171 (30%), Positives = 65/171 (38%), Gaps = 4/171 (2%)
 Frame = -3

Query: 525 TASQIRHSIRPWXXXXXXXXXXXXXXXXXXXXLRIQKNLYAFRANYXXXXXXXXXXXXXX 346
           TA  I  + RPW                     R+ +NL  FR NY              
Sbjct: 12  TAQSITGAARPWGDFLDLSAFSFPSSIADATT-RVTQNLTHFRINYSIILSILLGLTLIT 70

Query: 345 XXXXXXXXXXXIVAWIYLVFARDEPLVVFDFEIGGRXXXXXXXXXXXXXXXXXXVWWNIF 166
                       +AW +L FAR+EPL +F F I                     VW    
Sbjct: 71  RPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIGSLVTTGVWLRAL 130

Query: 165 LSVLISALVVCLHAILRTPDD--ADDMESPYGALLSVV--DEDGPARGPYT 25
            +V    LV+ LHA LR  DD  +DD+ESPYG +LS      DG ARG Y+
Sbjct: 131 TTVGFGVLVLILHAALRGTDDLVSDDLESPYGPMLSTSGGGNDG-ARGDYS 180


>ref|XP_002517019.1| conserved hypothetical protein [Ricinus communis]
           gi|223543654|gb|EEF45182.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 182

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 46/135 (34%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
 Frame = -3

Query: 426 RIQKNLYAFRANYXXXXXXXXXXXXXXXXXXXXXXXXXIVAWIYLVFARDE-PLVVFDFE 250
           R+ +NL  FR+NY                         ++ W++L FAR+E PL VF FE
Sbjct: 46  RVTQNLTHFRSNYSLIILLVLFLSLVYHPLSLIAFFITLIGWVFLYFAREEEPLRVFGFE 105

Query: 249 IGGRXXXXXXXXXXXXXXXXXXVWWNIFLSVLISALVVCLHAILRTPDD--ADDME-SPY 79
           +                     VW+N+ ++V I   +V LHA+LR+ DD  ADD+E SPY
Sbjct: 106 VNDFVVLVSLIAVTIFVLVWSGVWFNVAVAVAIGVGLVVLHAVLRSTDDLVADDIETSPY 165

Query: 78  GALLSVVDEDGPARG 34
             LLS  D+D   RG
Sbjct: 166 VNLLSDDDDDVILRG 180


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