BLASTX nr result

ID: Atractylodes21_contig00028263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028263
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637168.1| Polynucleotidyl transferase [Medicago trunca...   103   1e-20
ref|XP_002337133.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_003629173.1| Polynucleotidyl transferase [Medicago trunca...    82   5e-14
gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]               64   1e-08
ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana] ...    63   3e-08

>ref|XP_003637168.1| Polynucleotidyl transferase [Medicago truncatula]
           gi|355503103|gb|AES84306.1| Polynucleotidyl transferase
           [Medicago truncatula]
          Length = 239

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 3/100 (3%)
 Frame = -2

Query: 292 HHIIPE---TTTNPETSADKEKAPEVDKAIWSRLDATVLQWIYGTISNDLLHTIIEPDST 122
           HHI+P    TT    +SA+ E+        W+ LD+TVLQWIY TIS DLL TI+EPDST
Sbjct: 33  HHIVPSKDNTTPTDTSSAEFEQ--------WTTLDSTVLQWIYSTISTDLLTTILEPDST 84

Query: 121 AHKAWENLKKIFQDSKNSRAVLLENQFSNIRLDDFSNVSD 2
             +AW     IFQD++N+RAV LE +FSN R++DF NVS+
Sbjct: 85  TMEAWNRSSDIFQDNQNARAVTLEQEFSNTRMEDFPNVSN 124


>ref|XP_002337133.1| predicted protein [Populus trichocarpa] gi|222838337|gb|EEE76702.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/75 (56%), Positives = 57/75 (76%)
 Frame = -2

Query: 229 EVDKAIWSRLDATVLQWIYGTISNDLLHTIIEPDSTAHKAWENLKKIFQDSKNSRAVLLE 50
           + D  +WSR+DA VLQWIYGTIS DLL+ I+E DSTA  AW  L+ IF D+KNSRA+ LE
Sbjct: 9   DTDPDLWSRVDAIVLQWIYGTISEDLLNIILERDSTAALAWNRLRDIFSDNKNSRALYLE 68

Query: 49  NQFSNIRLDDFSNVS 5
            +FS ++++ F++ S
Sbjct: 69  QEFSKVQMEHFADAS 83


>ref|XP_003629173.1| Polynucleotidyl transferase [Medicago truncatula]
           gi|355523195|gb|AET03649.1| Polynucleotidyl transferase
           [Medicago truncatula]
          Length = 169

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/59 (64%), Positives = 46/59 (77%)
 Frame = -2

Query: 181 WIYGTISNDLLHTIIEPDSTAHKAWENLKKIFQDSKNSRAVLLENQFSNIRLDDFSNVS 5
           WIY TIS DLL TI+EP+STA + W  L  IFQD++N+RAV LE +FSN R+DDF NVS
Sbjct: 99  WIYSTISTDLLTTILEPNSTAVETWNRLTDIFQDNQNARAVTLEQEFSNTRMDDFPNVS 157


>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
          Length = 826

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = -2

Query: 223 DKAIWSRLDATVLQWIYGTISNDLLHTIIEPDSTAHKAWENLKKIFQDSKNSRAVLLENQ 44
           D+ +W ++D  VL WI+GT+S+DL  +++     A +AW  L+  F   K SRA+LLE Q
Sbjct: 117 DRPVWVQVDCVVLSWIFGTVSSDLQQSLMIRQRRAREAWCYLEDEFLGQKESRALLLETQ 176

Query: 43  FSNIRLDDFS 14
           F N+R D  +
Sbjct: 177 FRNLRQDSMT 186


>ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177756|dbj|BAB11069.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008231|gb|AED95614.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 369

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/66 (42%), Positives = 40/66 (60%)
 Frame = -2

Query: 211 WSRLDATVLQWIYGTISNDLLHTIIEPDSTAHKAWENLKKIFQDSKNSRAVLLENQFSNI 32
           W   D  V  WIYGTI++ LL TII+   TA   W +L+ +F+D+K +RA+  EN+    
Sbjct: 67  WKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTT 126

Query: 31  RLDDFS 14
            +DD S
Sbjct: 127 TIDDLS 132


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