BLASTX nr result

ID: Atractylodes21_contig00028251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028251
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001141883.1| hypothetical protein [Zea mays] gi|194706290...   168   8e-40
ref|XP_002328262.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|NP_001140877.1| uncharacterized protein LOC100272953 [Zea ma...   167   2e-39
ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] re...   166   3e-39
ref|NP_195290.1| Isocitrate dehydrogenase [NAD] regulatory subun...   166   3e-39

>ref|NP_001141883.1| hypothetical protein [Zea mays] gi|194706290|gb|ACF87229.1| unknown
           [Zea mays] gi|413922890|gb|AFW62822.1| hypothetical
           protein ZEAMMB73_715539 [Zea mays]
          Length = 373

 Score =  168 bits (425), Expect = 8e-40
 Identities = 89/122 (72%), Positives = 95/122 (77%)
 Frame = -1

Query: 617 EQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXVEYAIFEQGASAGNVGKPKMVEKK 438
           EQFDVMVTPNLYGNLV                     ++AIFEQGASAGNVG  K+VEKK
Sbjct: 251 EQFDVMVTPNLYGNLVANVAAGIAGGTGVMPGGNVGQDHAIFEQGASAGNVGNEKIVEKK 310

Query: 437 RANPVALLLSSAMMLRHLQLPEFADRLETAVKRVIYEGKYRTKDLGGSSTTQEVVDAVIS 258
           RANPVALLLSSAMMLRHLQ P FADRLETAVKRVI EGKYRTKDLGG+STTQEV+DAVI+
Sbjct: 311 RANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGKYRTKDLGGTSTTQEVIDAVIA 370

Query: 257 AL 252
            L
Sbjct: 371 KL 372


>ref|XP_002328262.1| predicted protein [Populus trichocarpa] gi|222837777|gb|EEE76142.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  167 bits (423), Expect = 1e-39
 Identities = 89/123 (72%), Positives = 95/123 (77%)
 Frame = -1

Query: 617 EQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXVEYAIFEQGASAGNVGKPKMVEKK 438
           EQFDVMVTPNLYGNLV                     +YA+FEQGASAGNVGK KMVE+K
Sbjct: 249 EQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADYAVFEQGASAGNVGKEKMVEQK 308

Query: 437 RANPVALLLSSAMMLRHLQLPEFADRLETAVKRVIYEGKYRTKDLGGSSTTQEVVDAVIS 258
           +ANPVALLLSSAMMLRHLQ P FADRLETAVKRVI EGK RTKDLGG STTQEVVDAVI+
Sbjct: 309 KANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEGKCRTKDLGGDSTTQEVVDAVIA 368

Query: 257 ALE 249
            L+
Sbjct: 369 NLD 371


>ref|NP_001140877.1| uncharacterized protein LOC100272953 [Zea mays]
           gi|194701554|gb|ACF84861.1| unknown [Zea mays]
          Length = 375

 Score =  167 bits (422), Expect = 2e-39
 Identities = 89/122 (72%), Positives = 94/122 (77%)
 Frame = -1

Query: 617 EQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXVEYAIFEQGASAGNVGKPKMVEKK 438
           EQFDVMVTPNLYGNLV                     ++AIFEQGASAGNVG  K+VEKK
Sbjct: 253 EQFDVMVTPNLYGNLVANVAAGIAGGTGVMPGGNVGQDHAIFEQGASAGNVGNEKIVEKK 312

Query: 437 RANPVALLLSSAMMLRHLQLPEFADRLETAVKRVIYEGKYRTKDLGGSSTTQEVVDAVIS 258
           RANPVALLLSSAMMLRHLQ P FADRLETAVKRVI EGKYRTKDLGG+STTQEV DAVI+
Sbjct: 313 RANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGKYRTKDLGGTSTTQEVTDAVIA 372

Query: 257 AL 252
            L
Sbjct: 373 KL 374


>ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
           mitochondrial-like [Cucumis sativus]
          Length = 381

 Score =  166 bits (420), Expect = 3e-39
 Identities = 84/123 (68%), Positives = 97/123 (78%)
 Frame = -1

Query: 617 EQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXVEYAIFEQGASAGNVGKPKMVEKK 438
           EQFDVMVTPNLYGNLV                     ++A+FEQGASAGNVG  ++VE+K
Sbjct: 259 EQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNERLVEQK 318

Query: 437 RANPVALLLSSAMMLRHLQLPEFADRLETAVKRVIYEGKYRTKDLGGSSTTQEVVDAVIS 258
           +ANPVALLLSSAMMLRHLQ P FADRLETAVK+VI+EGKYRTKDLGG STTQEV+DAVI+
Sbjct: 319 KANPVALLLSSAMMLRHLQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQEVIDAVIA 378

Query: 257 ALE 249
           +L+
Sbjct: 379 SLD 381


>ref|NP_195290.1| Isocitrate dehydrogenase [NAD] regulatory subunit 3 [Arabidopsis
           thaliana] gi|75100413|sp|O81796.1|IDH3_ARATH RecName:
           Full=Isocitrate dehydrogenase [NAD] regulatory subunit
           3, mitochondrial; AltName: Full=IDH-III; AltName:
           Full=Isocitric dehydrogenase 3; AltName:
           Full=NAD(+)-specific ICDH 3; Flags: Precursor
           gi|3367583|emb|CAA20035.1| NAD+ dependent isocitrate
           dehydrogenase -like protein [Arabidopsis thaliana]
           gi|7270516|emb|CAB80281.1| NAD+ dependent isocitrate
           dehydrogenase-like protein [Arabidopsis thaliana]
           gi|28393070|gb|AAO41969.1| putative NAD+ dependent
           isocitrate dehydrogenase [Arabidopsis thaliana]
           gi|29824211|gb|AAP04066.1| putative NAD+ dependent
           isocitrate dehydrogenase [Arabidopsis thaliana]
           gi|332661144|gb|AEE86544.1| Isocitrate dehydrogenase
           [NAD] regulatory subunit 3 [Arabidopsis thaliana]
          Length = 368

 Score =  166 bits (420), Expect = 3e-39
 Identities = 88/123 (71%), Positives = 95/123 (77%)
 Frame = -1

Query: 617 EQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXVEYAIFEQGASAGNVGKPKMVEKK 438
           EQFDVMVTPNLYGNL+                     E+AIFEQGASAGNVG  KMVE+K
Sbjct: 246 EQFDVMVTPNLYGNLIANTAAGIAGGTGVMPGGNVGAEHAIFEQGASAGNVGNDKMVEQK 305

Query: 437 RANPVALLLSSAMMLRHLQLPEFADRLETAVKRVIYEGKYRTKDLGGSSTTQEVVDAVIS 258
           +ANPVALLLSSAMMLRHL+ P FADRLETAVK+VI EGKYRTKDLGG  TTQEVVDAVI+
Sbjct: 306 KANPVALLLSSAMMLRHLRFPTFADRLETAVKQVIKEGKYRTKDLGGDCTTQEVVDAVIA 365

Query: 257 ALE 249
           ALE
Sbjct: 366 ALE 368


Top