BLASTX nr result

ID: Atractylodes21_contig00028237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028237
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...    92   6e-17
emb|CBI31382.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [...    89   3e-16
ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [...    88   6e-16
ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [...    88   6e-16

>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/76 (59%), Positives = 56/76 (73%)
 Frame = +3

Query: 3   SGTIDEVLEAVELILTKLFNEFYAEDGEEAEPRSKVRLIVPNXXXXXXXXXXXXXXRSFI 182
           SG  +E+++A+ELIL KL +E + EDG+EA+PRSKVRLIVPN              +SFI
Sbjct: 87  SGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFI 146

Query: 183 EDSQANIKISPQDNNY 230
           EDSQA+IKISPQDNNY
Sbjct: 147 EDSQASIKISPQDNNY 162


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/76 (59%), Positives = 56/76 (73%)
 Frame = +3

Query: 3   SGTIDEVLEAVELILTKLFNEFYAEDGEEAEPRSKVRLIVPNXXXXXXXXXXXXXXRSFI 182
           SG  +E+++A+ELIL KL +E + EDG+EA+PRSKVRLIVPN              +SFI
Sbjct: 135 SGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFI 194

Query: 183 EDSQANIKISPQDNNY 230
           EDSQA+IKISPQDNNY
Sbjct: 195 EDSQASIKISPQDNNY 210


>ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
           gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding
           protein Nova-2-like [Cucumis sativus]
          Length = 326

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/76 (56%), Positives = 57/76 (75%)
 Frame = +3

Query: 3   SGTIDEVLEAVELILTKLFNEFYAEDGEEAEPRSKVRLIVPNXXXXXXXXXXXXXXRSFI 182
           SG+I+E+L+A+EL+L KL +E +AE+G++ EPR+KVRLIVP+              +SFI
Sbjct: 88  SGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFI 147

Query: 183 EDSQANIKISPQDNNY 230
           EDSQA IKISPQDNNY
Sbjct: 148 EDSQAGIKISPQDNNY 163


>ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
          Length = 337

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/76 (57%), Positives = 54/76 (71%)
 Frame = +3

Query: 3   SGTIDEVLEAVELILTKLFNEFYAEDGEEAEPRSKVRLIVPNXXXXXXXXXXXXXXRSFI 182
           SG I+E+  AVELIL+KL +E ++ED  +AEP++KVRL+VPN              RSFI
Sbjct: 89  SGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGVTIRSFI 148

Query: 183 EDSQANIKISPQDNNY 230
           EDSQA IKISPQDNNY
Sbjct: 149 EDSQAGIKISPQDNNY 164


>ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
          Length = 337

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/76 (57%), Positives = 54/76 (71%)
 Frame = +3

Query: 3   SGTIDEVLEAVELILTKLFNEFYAEDGEEAEPRSKVRLIVPNXXXXXXXXXXXXXXRSFI 182
           SG I+E+  AVELIL+KL +E ++ED  +AEP++KVRL+VPN              RSFI
Sbjct: 89  SGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFI 148

Query: 183 EDSQANIKISPQDNNY 230
           EDSQA IKISPQDNNY
Sbjct: 149 EDSQAGIKISPQDNNY 164


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