BLASTX nr result

ID: Atractylodes21_contig00028221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028221
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270166.1| PREDICTED: upstream activation factor subuni...   126   6e-27
ref|XP_002523973.1| brg-1 associated factor, putative [Ricinus c...   126   7e-27
ref|NP_566210.1| SWIB/MDM2 domain-containing protein [Arabidopsi...   125   1e-26
gb|AAM65610.1| unknown [Arabidopsis thaliana]                         125   1e-26
ref|XP_002270707.1| PREDICTED: upstream activation factor subuni...   125   2e-26

>ref|XP_002270166.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera] gi|147798865|emb|CAN68050.1| hypothetical
           protein VITISV_015104 [Vitis vinifera]
           gi|296090194|emb|CBI40013.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  126 bits (317), Expect = 6e-27
 Identities = 57/80 (71%), Positives = 71/80 (88%)
 Frame = +1

Query: 286 GILKPLPISPALGHFLGVSESARTDAVKKIWEYIKLHGLQNPTNKREIICDDKLKMIFDG 465
           GI KP+P+SPAL  FLGV E++R +AVKKIWE+IKL+ LQNPTNKREI+CD+KLK +F+G
Sbjct: 48  GITKPVPVSPALRKFLGVPEASRAEAVKKIWEHIKLNNLQNPTNKREILCDEKLKSVFEG 107

Query: 466 RDKVGFLEIAKLLAPHFVKT 525
           +DKVGFLEI KLL+ HF+KT
Sbjct: 108 KDKVGFLEIGKLLSHHFIKT 127


>ref|XP_002523973.1| brg-1 associated factor, putative [Ricinus communis]
           gi|223536700|gb|EEF38341.1| brg-1 associated factor,
           putative [Ricinus communis]
          Length = 134

 Score =  126 bits (316), Expect = 7e-27
 Identities = 60/88 (68%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
 Frame = +1

Query: 265 EKTVKPVGILKPLPISPALGHFLG-VSESARTDAVKKIWEYIKLHGLQNPTNKREIICDD 441
           +K V+  GILK  P+SPAL  FLG V E++RTD VKKIW++IKLH LQNPTNK+EI CD+
Sbjct: 46  DKPVRATGILKAAPVSPALSEFLGGVPEASRTDVVKKIWDHIKLHNLQNPTNKKEIFCDE 105

Query: 442 KLKMIFDGRDKVGFLEIAKLLAPHFVKT 525
           KLK IFDG++KVGFLEI KLL+ HFVK+
Sbjct: 106 KLKTIFDGKEKVGFLEIGKLLSRHFVKS 133


>ref|NP_566210.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
           gi|6091763|gb|AAF03473.1|AC009327_12 hypothetical
           protein [Arabidopsis thaliana]
           gi|26450613|dbj|BAC42418.1| unknown protein [Arabidopsis
           thaliana] gi|28372894|gb|AAO39929.1| At3g03590
           [Arabidopsis thaliana] gi|332640439|gb|AEE73960.1|
           SWIB/MDM2 domain-containing protein [Arabidopsis
           thaliana]
          Length = 143

 Score =  125 bits (314), Expect = 1e-26
 Identities = 57/88 (64%), Positives = 70/88 (79%)
 Frame = +1

Query: 265 EKTVKPVGILKPLPISPALGHFLGVSESARTDAVKKIWEYIKLHGLQNPTNKREIICDDK 444
           +KT +  GI K  P+SP L  FLG  E++RTDA+K IW YIK H LQNP +KREI CD+ 
Sbjct: 56  KKTPRSTGIFKVTPVSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKREIFCDET 115

Query: 445 LKMIFDGRDKVGFLEIAKLLAPHFVKTA 528
           LK+IF+G+DKVGFLEI+KLL+PHFVKTA
Sbjct: 116 LKLIFEGKDKVGFLEISKLLSPHFVKTA 143


>gb|AAM65610.1| unknown [Arabidopsis thaliana]
          Length = 143

 Score =  125 bits (314), Expect = 1e-26
 Identities = 57/88 (64%), Positives = 70/88 (79%)
 Frame = +1

Query: 265 EKTVKPVGILKPLPISPALGHFLGVSESARTDAVKKIWEYIKLHGLQNPTNKREIICDDK 444
           +KT +  GI K  P+SP L  FLG  E++RTDA+K IW YIK H LQNP +KREI CD+ 
Sbjct: 56  KKTPRSTGIFKVTPVSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKREIFCDET 115

Query: 445 LKMIFDGRDKVGFLEIAKLLAPHFVKTA 528
           LK+IF+G+DKVGFLEI+KLL+PHFVKTA
Sbjct: 116 LKLIFEGKDKVGFLEISKLLSPHFVKTA 143


>ref|XP_002270707.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera] gi|296085458|emb|CBI29190.3| unnamed protein
           product [Vitis vinifera]
          Length = 115

 Score =  125 bits (313), Expect = 2e-26
 Identities = 58/80 (72%), Positives = 71/80 (88%), Gaps = 1/80 (1%)
 Frame = +1

Query: 286 GILKPLPISPALGHFLG-VSESARTDAVKKIWEYIKLHGLQNPTNKREIICDDKLKMIFD 462
           GI KP+P+SP LG FLG V +++R+ A+KK+WE+IKLH LQNPTNK+EI CD+KLK IFD
Sbjct: 34  GITKPVPVSPQLGKFLGGVPQASRSLAIKKVWEHIKLHNLQNPTNKKEICCDEKLKTIFD 93

Query: 463 GRDKVGFLEIAKLLAPHFVK 522
           G+DKVGFLEIAKLL+PHFVK
Sbjct: 94  GKDKVGFLEIAKLLSPHFVK 113


Top