BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028193
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   105   4e-21
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     105   4e-21
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     104   7e-21
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   101   7e-20
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   100   9e-20

>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/105 (49%), Positives = 71/105 (67%)
 Frame = -3

Query: 318 PPPNPSARNAYAEVRATYDKYQSDTVDVACLMQAAMSPELLQDHEEMDAWGMITSLKTMF 139
           P P     NA A  R  ++K  +D +D++CLM A MSPEL + +E +DA  +IT L+ MF
Sbjct: 115 PFPANLPNNAPAAQRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMF 174

Query: 138 EKQAKLERFNTVKTFVSCKMQEGELVSPHVLKMKGYVDRLKRLGF 4
           E QA+ ERFNT K+  +C++ EG LVSPHV+KM GY + L +LGF
Sbjct: 175 EDQARAERFNTSKSLFACRLAEGNLVSPHVIKMIGYTESLDKLGF 219


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/105 (49%), Positives = 71/105 (67%)
 Frame = -3

Query: 318 PPPNPSARNAYAEVRATYDKYQSDTVDVACLMQAAMSPELLQDHEEMDAWGMITSLKTMF 139
           P P     NA A  R  ++K  +D +D++CLM A MSPEL + +E +DA  +IT L+ MF
Sbjct: 48  PFPANLPNNAPAAQRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMF 107

Query: 138 EKQAKLERFNTVKTFVSCKMQEGELVSPHVLKMKGYVDRLKRLGF 4
           E QA+ ERFNT K+  +C++ EG LVSPHV+KM GY + L +LGF
Sbjct: 108 EDQARAERFNTSKSLFACRLAEGNLVSPHVIKMIGYTESLDKLGF 152


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/105 (47%), Positives = 70/105 (66%)
 Frame = -3

Query: 318 PPPNPSARNAYAEVRATYDKYQSDTVDVACLMQAAMSPELLQDHEEMDAWGMITSLKTMF 139
           P P     NA A  R  ++K+ +D +D++CLM A MSPEL + +E  DA   I  L+ MF
Sbjct: 49  PYPEELPNNATATARRGFEKHTNDALDISCLMLATMSPELQKQYESSDAHTTIQGLRGMF 108

Query: 138 EKQAKLERFNTVKTFVSCKMQEGELVSPHVLKMKGYVDRLKRLGF 4
           E QA+ ERFNT K+  +C++ EG  VSPHV+KM GY++ L++LGF
Sbjct: 109 ENQARDERFNTSKSLFACRLVEGNPVSPHVIKMIGYIESLEKLGF 153


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/105 (47%), Positives = 71/105 (67%)
 Frame = -3

Query: 318 PPPNPSARNAYAEVRATYDKYQSDTVDVACLMQAAMSPELLQDHEEMDAWGMITSLKTMF 139
           P P     NA A  R  ++K  +D +D++CLM A MSPEL + +E +DA  +IT L+ MF
Sbjct: 48  PFPADLPNNAPAAQRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMF 107

Query: 138 EKQAKLERFNTVKTFVSCKMQEGELVSPHVLKMKGYVDRLKRLGF 4
           E QA+ +RFNT K+  +C++ EG  VSPHV+KM GY + L++LGF
Sbjct: 108 EDQARAKRFNTSKSLFACRLAEGNPVSPHVIKMIGYNETLEKLGF 152


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/97 (49%), Positives = 68/97 (70%)
 Frame = -3

Query: 294 NAYAEVRATYDKYQSDTVDVACLMQAAMSPELLQDHEEMDAWGMITSLKTMFEKQAKLER 115
           NA A  R  ++K  +D +D++CLM A MSPEL + +E +DA  +IT L+ MFE QA+ ER
Sbjct: 135 NALAAQRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAER 194

Query: 114 FNTVKTFVSCKMQEGELVSPHVLKMKGYVDRLKRLGF 4
           FNT K+  +C++ EG  VSPHV+K+ GY + L +LGF
Sbjct: 195 FNTSKSLFACRLAEGNPVSPHVIKIIGYTESLDKLGF 231