BLASTX nr result

ID: Atractylodes21_contig00028171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028171
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...   109   5e-22
ref|XP_003608515.1| Chromodomain-helicase-DNA-binding protein, p...    96   8e-18
emb|CBI27197.3| unnamed protein product [Vitis vinifera]               95   2e-17
ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793...    94   3e-17
ref|XP_002329920.1| chromatin remodeling complex subunit [Populu...    82   1e-13

>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score =  109 bits (273), Expect = 5e-22
 Identities = 69/194 (35%), Positives = 116/194 (59%), Gaps = 19/194 (9%)
 Frame = -1

Query: 612 SDDVQKKPKTDKGKYAADSSRKRG---------TSSSQLNRKSVKHAKAKSLSKDDMGSE 460
           SDD QKK +TDKGK+AA++S+K G         TS S   R++     +  LSK+D+G +
Sbjct: 303 SDDSQKKSRTDKGKHAANTSKKSGSKANSMSPETSRSHRKRRTADKGVSAGLSKEDVGIK 362

Query: 459 INNITLKDERFLEELTNSSHELGEA-GKLEKFADLSQN---KFQQVDRVLGCRIQGTERN 292
            +++  K+E+   E TN SH++ EA G +++     +N   + QQVDRVLGCR+QG   N
Sbjct: 363 SSDVQKKNEKLPVEGTNPSHDVVEAGGNMDETVTCEENVTGELQQVDRVLGCRVQGDNTN 422

Query: 291 SARPHSAAEADDLASQSLVVGQS-----EENLTCNASDVGD-AEMVNEGTENISSPSDRQ 130
           S+   S     DL S ++++ ++     EE L+ +    G+ AE ++EG + +++  + +
Sbjct: 423 SSCHISVTVPTDLPSDNVLIPENQNRSPEEILSGDVDLDGETAEKLHEGCQGMTNCFEGE 482

Query: 129 THVEDDTRVDKVNV 88
            ++++D RVDK+NV
Sbjct: 483 KNIKNDVRVDKINV 496


>ref|XP_003608515.1| Chromodomain-helicase-DNA-binding protein, partial [Medicago
            truncatula] gi|355509570|gb|AES90712.1|
            Chromodomain-helicase-DNA-binding protein, partial
            [Medicago truncatula]
          Length = 1406

 Score = 95.9 bits (237), Expect = 8e-18
 Identities = 85/268 (31%), Positives = 130/268 (48%), Gaps = 23/268 (8%)
 Frame = -1

Query: 738  SKVMELEMN----EEKSDRDHSK---KKEVVLAXXXXXXXXXXXXXXVPSDDV-QKKPKT 583
            SK+  L+ N    EEK D    K   +K +VLA              V  D+  QKK +T
Sbjct: 246  SKITNLDANDDLLEEKPDLSCDKIPFRKTLVLAITVGGEEMGKRKHKVIGDNANQKKRRT 305

Query: 582  DKGKYAADS--SRKRGTSSSQLNRKSVKHAKAKSLSKDDMGSEINNITLKDERFLEELTN 409
            +KGK    +    K G +  Q  +KS  H  + S SK D+G + ++   KD++F + + +
Sbjct: 306  EKGKKVVITPIKSKSGNNKVQTKQKSKTHKISISASKGDVGKKKSDAQQKDKKFSQVMKD 365

Query: 408  SSHELGEAGK----LEKFADLSQNKFQQVDRVLGCRIQGTERNSARPHSAAEADDLASQS 241
            SS+ L +AG          D +  +  QVD+VLGCRIQG + NS R  S    DD  S  
Sbjct: 366  SSNVLDKAGSHLDDTLMHEDSTIIESLQVDQVLGCRIQGEDTNSIRQLSLKVGDDSPSGD 425

Query: 240  LVVGQ-----SEENLTC-NASDVGDAEMVNEGTENISSPSDRQTHVEDDTRVDKVNV--- 88
            LV+ +     +E+N  C N  D   AE +    +N+ S  + + H  D  RV+K++V   
Sbjct: 426  LVMSENQTRLAEDNSACDNDLDGEIAENLVHDPQNVKSSDEGELHNTD--RVEKIHVYRR 483

Query: 87   SLTNHHSEENIADSVGRTMDDPGTTATE 4
            S+T      N+ +S+ +  DD G+ A +
Sbjct: 484  SITKESKNGNLLNSLSKATDDLGSCARD 511


>emb|CBI27197.3| unnamed protein product [Vitis vinifera]
          Length = 1638

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 32/200 (16%)
 Frame = -1

Query: 612 SDDVQKKPKTDKGKYAADSSRKRG---------TSSSQLNRKSVKHAKAKSLSKDDMGSE 460
           SDD QKK +TDKGK+AA++S+K G         TS S   R++     +  LSK+D+G +
Sbjct: 184 SDDSQKKSRTDKGKHAANTSKKSGSKANSMSPETSRSHRKRRTADKGVSAGLSKEDVGIK 243

Query: 459 INNITLKDERFLEELTNSSHELGEA-GKLEKFADLSQN---KFQQVDRVLGCRIQGTERN 292
            +++  K+E+   E TN SH++ EA G +++     +N   + QQVDRVLGCR+QG   N
Sbjct: 244 SSDVQKKNEKLPVEGTNPSHDVVEAGGNMDETVTCEENVTGELQQVDRVLGCRVQGDNTN 303

Query: 291 SARPHSAAEADDLASQSLVVGQS-----EENLTCNASDVGD-AEMVNEG----------- 163
           S+   S     DL S ++++ ++     EE L+ +    G+ AE ++EG           
Sbjct: 304 SSCHISVTVPTDLPSDNVLIPENQNRSPEEILSGDVDLDGETAEKLHEGSIDGKDQDQSA 363

Query: 162 --TENISSPSDRQTHVEDDT 109
             TEN+      +  +ED T
Sbjct: 364 VTTENLRKQPTEKMVIEDST 383


>ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
          Length = 2325

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 83/264 (31%), Positives = 132/264 (50%), Gaps = 24/264 (9%)
 Frame = -1

Query: 738  SKVMELEMNEE----KSDRDHSK---KKEVVLAXXXXXXXXXXXXXXVPSDDV-QKKPKT 583
            SK+  LE N+E    K+D   +K   +K +VLA              V +D+  QKK KT
Sbjct: 245  SKITSLEANDEQLEGKTDLSCNKIPLRKTLVLAIAASGEEVRKRKNKVVNDNTSQKKRKT 304

Query: 582  DKGKYAADSSR---KRGTSSSQLNRKSVKHAKAKSLSKDDMGSEINNITLKDERFLEELT 412
            +KGK   + S    K G +     +KS+ H+ + S+SK+D+G++ +N   KDE+  + + 
Sbjct: 305  EKGKKIVNPSSIKSKSGNNKVHKKQKSITHSISASVSKEDVGNKNSNAQQKDEKVSQLMK 364

Query: 411  NSSHELGEAGKLEKFADLSQN----KFQQVDRVLGCRIQGTERNSARPHSAAEADDLASQ 244
            ++  E+ +A        L +     +  QVDRVLGCRIQG   NS+R  S     D  S 
Sbjct: 365  DTPSEVDKAQSRVDKTLLHEGSAIVESLQVDRVLGCRIQGENANSSRHLSLNVVGDSPSG 424

Query: 243  SLVVGQS-----EENLTC-NASDVGDAEMVNEGTENISSPSDRQTHVEDDTRVDKVNV-- 88
             LV+ ++     +EN  C N  DV   E   +  +N+ S SD +  +++  RV+ ++V  
Sbjct: 425  DLVILENQSRLLDENSACANDLDVESTENHIDDRQNVKS-SDEEGILKNTDRVEGIHVYR 483

Query: 87   -SLTNHHSEENIADSVGRTMDDPG 19
             S+T    + N  DS+ +  DD G
Sbjct: 484  RSITKESKKGNPVDSLSKATDDLG 507


>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222871157|gb|EEF08288.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2332

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 84/275 (30%), Positives = 124/275 (45%), Gaps = 34/275 (12%)
 Frame = -1

Query: 738  SKVMELEMNEEKSDRDH-------SKKKEVVLAXXXXXXXXXXXXXXVPSDDVQKKPKTD 580
            SK+ E + N E S   H       S +K++VLA                 D V KKP+T+
Sbjct: 240  SKLTESKPNNEGSGEKHVLACDNGSPRKKIVLAIGAASENRKRKLEGNSVDSV-KKPRTN 298

Query: 579  KGKYAADSSRKR------GTSSSQLNRKSVKHAKAKSLSKDDMGSEINNITL--KDERF- 427
            KGK  +   R +      GTS     RK++ H  +  L  +D+  E+ NI L  KDE+  
Sbjct: 299  KGKRTSIKYRPKANNASSGTSKLNQKRKTINHEVSLLLPTEDV--EVKNIELQKKDEKNP 356

Query: 426  ------LEELTNSSHELGEAGKLEKFA--DLSQN-KFQQVDRVLGCRIQGTERNSARPHS 274
                  LEE   +   + E  K E     +L QN    QVDRVLGCRI+G   + +   S
Sbjct: 357  VEVAQPLEESYKAEVHVDETQKCEDIVMTELQQNISTLQVDRVLGCRIEGENASLSCCTS 416

Query: 273  AAEADDLASQSLVVGQSEE-NLTCNA-----SDVGDAEMVNEGTENISSPSDRQTHVEDD 112
                +D  S  L++ ++E  +L   A     SD+G AE   EG   +   S++   V++D
Sbjct: 417  LISKNDRPSDELLISETENGHLEEKAAGDTYSDLGVAENHVEGHPGVIESSEKDESVKND 476

Query: 111  TRVDKVNV---SLTNHHSEENIADSVGRTMDDPGT 16
             RVD + V   S +  +   N  D +G+   D G+
Sbjct: 477  IRVDTIRVYRRSASKDYKGGNSKDLLGKDGKDSGS 511


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