BLASTX nr result

ID: Atractylodes21_contig00028126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028126
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882555.1| rho GDP-dissociation inhibitor family protei...   293   8e-77
ref|NP_187445.1| Rho GDP-dissociation inhibitor 1 [Arabidopsis t...   292   1e-76
ref|XP_002532283.1| Rho GDP-dissociation inhibitor, putative [Ri...   288   1e-75
ref|XP_003601554.1| RHO protein GDP dissociation inhibitor [Medi...   288   3e-75
ref|XP_002322530.1| predicted protein [Populus trichocarpa] gi|2...   286   1e-74

>ref|XP_002882555.1| rho GDP-dissociation inhibitor family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328395|gb|EFH58814.1| rho
           GDP-dissociation inhibitor family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 241

 Score =  293 bits (749), Expect = 8e-77
 Identities = 140/222 (63%), Positives = 169/222 (76%), Gaps = 3/222 (1%)
 Frame = +3

Query: 258 NMGDTDDKDKKNGESHETPPSGSVVHDDASESSCYGTDEE---DTQIHLGPKISIKEHLE 428
           N  + D  D+ +     T      +    SESS   T+EE   D+++ LGP+ +IKEHLE
Sbjct: 17  NNNNKDGDDENSSSRTRTRTDDDALARQMSESSLCATEEEEDDDSKLQLGPQYTIKEHLE 76

Query: 429 KDKDDESLRRWKEQLLGXXXXXXXXXXXXXXXKILSLTIISPGRPDIVLEIPESGNPKGQ 608
           KDKDDESLR+WKEQLLG               +ILSL I+SPGRPDIVL +PE+GNPKG 
Sbjct: 77  KDKDDESLRKWKEQLLGSVDVTNIGETLDPEVRILSLAILSPGRPDIVLLVPENGNPKGM 136

Query: 609 WFTLKEGSKYNLKFSIKVSNDIVCGLKYTNTVWKTGIKVDSSKEMLGTFSPQAEPYTHVM 788
           WFTLKEGSKYNLKF+ +V+N+IV GL+YTNTVWKTG+KVD +KEMLGTFSPQ EPY HVM
Sbjct: 137 WFTLKEGSKYNLKFTFQVNNNIVSGLRYTNTVWKTGVKVDRAKEMLGTFSPQLEPYNHVM 196

Query: 789 PEEVTPSGMFARGNYSAKTKFVDDDNKCYLELNYTFDIQKDW 914
           PEE TPSGMFARG+YSA+TKF+DDDNKCYLE+NY+FDI+K+W
Sbjct: 197 PEETTPSGMFARGSYSARTKFLDDDNKCYLEINYSFDIRKEW 238


>ref|NP_187445.1| Rho GDP-dissociation inhibitor 1 [Arabidopsis thaliana]
           gi|21759146|sp|Q9SFC6.1|GDIR_ARATH RecName: Full=Rho
           GDP-dissociation inhibitor 1; Short=AtRhoGDI1; Short=Rho
           GDI-1 gi|6648200|gb|AAF21198.1|AC013483_22 putative RHO
           GDP-dissociation inhibitor 1 [Arabidopsis thaliana]
           gi|15866274|gb|AAL10299.1|AF412276_1 Rho
           GDP-dissociation inhibitor 1 [Arabidopsis thaliana]
           gi|21553639|gb|AAM62732.1| putative RHO GDP-dissociation
           inhibitor 1 [Arabidopsis thaliana]
           gi|26451537|dbj|BAC42866.1| putative RHO
           GDP-dissociation inhibitor 1 [Arabidopsis thaliana]
           gi|28973347|gb|AAO63998.1| putative RHO GDP-dissociation
           inhibitor 1 [Arabidopsis thaliana]
           gi|332641093|gb|AEE74614.1| Rho GDP-dissociation
           inhibitor 1 [Arabidopsis thaliana]
          Length = 240

 Score =  292 bits (747), Expect = 1e-76
 Identities = 146/229 (63%), Positives = 174/229 (75%), Gaps = 10/229 (4%)
 Frame = +3

Query: 258 NMGDTDDKDKKNGESHETPPSGSVVH--DDA-----SESSCYGTDEE---DTQIHLGPKI 407
           +MG  D+ + KN +  +   S S     DDA     SESS   T+EE   D+++ LGP+ 
Sbjct: 9   DMGFDDNNNNKNNKDGDDENSSSRTRADDDALSRQMSESSLCATEEEEDDDSKLQLGPQY 68

Query: 408 SIKEHLEKDKDDESLRRWKEQLLGXXXXXXXXXXXXXXXKILSLTIISPGRPDIVLEIPE 587
           +IKEHLEKDKDDESLR+WKEQLLG               +I SL IISPGRPDIVL +PE
Sbjct: 69  TIKEHLEKDKDDESLRKWKEQLLGSVDVTNIGETLDPEVRIDSLAIISPGRPDIVLLVPE 128

Query: 588 SGNPKGQWFTLKEGSKYNLKFSIKVSNDIVCGLKYTNTVWKTGIKVDSSKEMLGTFSPQA 767
           +GNPKG WFTLKEGSKYNLKF+  V+N+IV GL+YTNTVWKTG+KVD +KEMLGTFSPQ 
Sbjct: 129 NGNPKGMWFTLKEGSKYNLKFTFHVNNNIVSGLRYTNTVWKTGVKVDRAKEMLGTFSPQL 188

Query: 768 EPYTHVMPEEVTPSGMFARGNYSAKTKFVDDDNKCYLELNYTFDIQKDW 914
           EPY HVMPEE TPSGMFARG+YSA+TKF+DDDNKCYLE+NY+FDI+K+W
Sbjct: 189 EPYNHVMPEETTPSGMFARGSYSARTKFLDDDNKCYLEINYSFDIRKEW 237


>ref|XP_002532283.1| Rho GDP-dissociation inhibitor, putative [Ricinus communis]
           gi|223528017|gb|EEF30098.1| Rho GDP-dissociation
           inhibitor, putative [Ricinus communis]
          Length = 246

 Score =  288 bits (738), Expect = 1e-75
 Identities = 148/232 (63%), Positives = 170/232 (73%), Gaps = 12/232 (5%)
 Frame = +3

Query: 258 NMGDTDDK--DKKNGESHETPPSGSVVHDDASESSCYGTD----EEDT------QIHLGP 401
           NMG  D+K  ++K+  SHE    G     +        TD    EED       +I LGP
Sbjct: 13  NMGLDDNKNEEEKSETSHEHLEEGDSAAGEKYARQMSETDLSVNEEDEDEEGSHKIELGP 72

Query: 402 KISIKEHLEKDKDDESLRRWKEQLLGXXXXXXXXXXXXXXXKILSLTIISPGRPDIVLEI 581
           + ++KEHLEKDKDDESLR+WKEQLLG               KILSL+IISPGR DIVL +
Sbjct: 73  QCTLKEHLEKDKDDESLRKWKEQLLGSVDFESIGETLEPEVKILSLSIISPGRSDIVLSV 132

Query: 582 PESGNPKGQWFTLKEGSKYNLKFSIKVSNDIVCGLKYTNTVWKTGIKVDSSKEMLGTFSP 761
           PE G PKG WFTLKEGS YNL FS +VSN+IV GLKYTNTVWKTG+KVDS+KEMLGTFSP
Sbjct: 133 PEDGKPKGSWFTLKEGSHYNLMFSFQVSNNIVSGLKYTNTVWKTGVKVDSAKEMLGTFSP 192

Query: 762 QAEPYTHVMPEEVTPSGMFARGNYSAKTKFVDDDNKCYLELNYTFDIQKDWA 917
           Q EPYTHVMPEE TPSGMFARG+YSAK+KF+DDDNKCYLE+NYTFDI+K+WA
Sbjct: 193 QPEPYTHVMPEETTPSGMFARGSYSAKSKFLDDDNKCYLEINYTFDIRKEWA 244


>ref|XP_003601554.1| RHO protein GDP dissociation inhibitor [Medicago truncatula]
           gi|355490602|gb|AES71805.1| RHO protein GDP dissociation
           inhibitor [Medicago truncatula]
          Length = 226

 Score =  288 bits (736), Expect = 3e-75
 Identities = 144/224 (64%), Positives = 166/224 (74%), Gaps = 8/224 (3%)
 Frame = +3

Query: 270 TDDKDKKNGESHETPPSGSVVHDD----ASESSCYGTDEEDTQ----IHLGPKISIKEHL 425
           +DD++K+ G++ E        H+      SESS Y T+EE+ +    I LGP  +IKEHL
Sbjct: 3   SDDENKETGQTSEAGGEKDEHHEPLTRHTSESSVYATEEEEDEYGAKIQLGPMCTIKEHL 62

Query: 426 EKDKDDESLRRWKEQLLGXXXXXXXXXXXXXXXKILSLTIISPGRPDIVLEIPESGNPKG 605
           EKDKDDESLR+WKEQLLG                  SL+IISPGR DIVL IPE G P+G
Sbjct: 63  EKDKDDESLRKWKEQLLGSVDVNNIGEILEPEVNFTSLSIISPGRDDIVLPIPEDGKPQG 122

Query: 606 QWFTLKEGSKYNLKFSIKVSNDIVCGLKYTNTVWKTGIKVDSSKEMLGTFSPQAEPYTHV 785
            WFTLKEGS Y LKF+  VSN+IV GLKYTNTVWKT +KVDSSKEMLGTFSPQ EPYTH 
Sbjct: 123 LWFTLKEGSPYRLKFNFVVSNNIVSGLKYTNTVWKTAVKVDSSKEMLGTFSPQPEPYTHE 182

Query: 786 MPEEVTPSGMFARGNYSAKTKFVDDDNKCYLELNYTFDIQKDWA 917
           MPEEVTPSG+FARG YSA+TKF+DDDNKCYLE+NYTFDI+KDWA
Sbjct: 183 MPEEVTPSGIFARGQYSARTKFLDDDNKCYLEINYTFDIRKDWA 226


>ref|XP_002322530.1| predicted protein [Populus trichocarpa] gi|222867160|gb|EEF04291.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  286 bits (731), Expect = 1e-74
 Identities = 139/214 (64%), Positives = 163/214 (76%), Gaps = 8/214 (3%)
 Frame = +3

Query: 297 ESHETPPSGSVVHDDASESSCYGTDEEDT--------QIHLGPKISIKEHLEKDKDDESL 452
           E++   P    +    SESS YGTD+E+         +I LGP+ ++KE LEKDKDDESL
Sbjct: 39  ENNVDEPKSGGISRKMSESSLYGTDQEEEDDEETNERKIELGPQCTLKEQLEKDKDDESL 98

Query: 453 RRWKEQLLGXXXXXXXXXXXXXXXKILSLTIISPGRPDIVLEIPESGNPKGQWFTLKEGS 632
           RRWKEQLLG               KILSL I S GRPDIVL +PE+G PKG WFTLKEGS
Sbjct: 99  RRWKEQLLGAVDIEAAGETLEPEVKILSLEIKSSGRPDIVLSVPENGKPKGSWFTLKEGS 158

Query: 633 KYNLKFSIKVSNDIVCGLKYTNTVWKTGIKVDSSKEMLGTFSPQAEPYTHVMPEEVTPSG 812
           +Y+L+F+ +V N+IV GLKYTNTVWKTGIKVDSSKEM+GTFSPQ EPYTH MPEE TPSG
Sbjct: 159 RYSLQFTFEVKNNIVSGLKYTNTVWKTGIKVDSSKEMIGTFSPQTEPYTHEMPEETTPSG 218

Query: 813 MFARGNYSAKTKFVDDDNKCYLELNYTFDIQKDW 914
           MFARG+Y+A++KFVDDDNKCYLE+NYTFDI+KDW
Sbjct: 219 MFARGSYAARSKFVDDDNKCYLEINYTFDIRKDW 252


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