BLASTX nr result

ID: Atractylodes21_contig00028077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028077
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP54302.1| ARF domain class transcription factor [Pyrus x br...   219   1e-54
gb|ADL36583.1| ARF domain class transcription factor [Malus x do...   219   1e-54
ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ri...   213   5e-53
ref|XP_002311698.1| predicted protein [Populus trichocarpa] gi|2...   213   6e-53
ref|XP_002314509.1| predicted protein [Populus trichocarpa] gi|2...   209   7e-52

>gb|AFP54302.1| ARF domain class transcription factor [Pyrus x bretschneideri]
          Length = 306

 Score =  219 bits (557), Expect = 1e-54
 Identities = 109/178 (61%), Positives = 134/178 (75%)
 Frame = +2

Query: 248 QVVGWPPVKTYRMNSLVNQAKFSKNEEEXXXXXXXXXXXXXXXXXXXEKMVKETGLSGFV 427
           QVVGWPP+   RMNSLVNQAK ++ E++                   +  VKE G  GFV
Sbjct: 132 QVVGWPPISAARMNSLVNQAKTARAEDDTAVGEKSKDTSKKKINVGSKTTVKEKGHLGFV 191

Query: 428 KVNMDGLPIGRKVDLNAHDCYETLAQALEIMFLKASASTTSLRREKQQAKQHSRLLDGSS 607
           KVNMDG+PIGRKVDLNAH CYETLAQ LE MF+   + TT++  + +QAK+ S+LLDGSS
Sbjct: 192 KVNMDGIPIGRKVDLNAHSCYETLAQTLEEMFI---SPTTAIGGDTEQAKKPSKLLDGSS 248

Query: 608 EFVLTYEDKEGDWMLVGDVPWRMFLGTVKRLRIMKTSDANGLAPRYQEKNHKPKSKQV 781
           EFVLTYEDKEGDWMLVGDVPW MFLG+VKRLRIM+TS+ANGLAPR+QE++ + ++K +
Sbjct: 249 EFVLTYEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEANGLAPRFQERSERQRNKPI 306


>gb|ADL36583.1| ARF domain class transcription factor [Malus x domestica]
          Length = 306

 Score =  219 bits (557), Expect = 1e-54
 Identities = 109/178 (61%), Positives = 134/178 (75%)
 Frame = +2

Query: 248 QVVGWPPVKTYRMNSLVNQAKFSKNEEEXXXXXXXXXXXXXXXXXXXEKMVKETGLSGFV 427
           QVVGWPP+   RMNSLVNQAK ++ E++                   +  VKE G  GFV
Sbjct: 132 QVVGWPPISAARMNSLVNQAKTARAEDDTAVGEKSKDTSKKKINVGSKTTVKEKGHLGFV 191

Query: 428 KVNMDGLPIGRKVDLNAHDCYETLAQALEIMFLKASASTTSLRREKQQAKQHSRLLDGSS 607
           KVNMDG+PIGRKVDLNAH CYETLAQ LE MF+   + TT++  + +QAK+ S+LLDGSS
Sbjct: 192 KVNMDGIPIGRKVDLNAHSCYETLAQTLEEMFI---SPTTTIGGDTEQAKKPSKLLDGSS 248

Query: 608 EFVLTYEDKEGDWMLVGDVPWRMFLGTVKRLRIMKTSDANGLAPRYQEKNHKPKSKQV 781
           EFVLTYEDKEGDWMLVGDVPW MFLG+VKRLRIM+TS+ANGLAPR+QE++ + ++K +
Sbjct: 249 EFVLTYEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEANGLAPRFQERSERQRNKPI 306


>ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
           gi|223532214|gb|EEF34018.1| Auxin-responsive protein
           IAA13, putative [Ricinus communis]
          Length = 318

 Score =  213 bits (543), Expect = 5e-53
 Identities = 110/181 (60%), Positives = 131/181 (72%), Gaps = 3/181 (1%)
 Frame = +2

Query: 248 QVVGWPPVKTYRMNSLVNQAKFSKNEEEXXXXXXXXXXXXXXXXXXXEKMV---KETGLS 418
           Q+VGWPPV+TYR+NSLVNQAK S++EE+                    K      E G  
Sbjct: 138 QIVGWPPVRTYRINSLVNQAKASRSEEDKSVVEQDKSKDASKKICNGSKTNATNNEKGHL 197

Query: 419 GFVKVNMDGLPIGRKVDLNAHDCYETLAQALEIMFLKASASTTSLRREKQQAKQHSRLLD 598
           GFVKVNMDG+PIGRKVDLNAH  YETLAQ LE MF +++ S  S   EKQQ+ + S+LLD
Sbjct: 198 GFVKVNMDGIPIGRKVDLNAHASYETLAQTLEDMFFRSTPSINSTGGEKQQSTKPSKLLD 257

Query: 599 GSSEFVLTYEDKEGDWMLVGDVPWRMFLGTVKRLRIMKTSDANGLAPRYQEKNHKPKSKQ 778
           GSSEFVLTYEDKEGDWMLVGDVPW MFL +VKRLRIM+TS+ANGLAPR+QE+  + + K 
Sbjct: 258 GSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRFQERTGRQRRKP 317

Query: 779 V 781
           +
Sbjct: 318 I 318


>ref|XP_002311698.1| predicted protein [Populus trichocarpa] gi|222851518|gb|EEE89065.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  213 bits (542), Expect = 6e-53
 Identities = 108/182 (59%), Positives = 130/182 (71%), Gaps = 4/182 (2%)
 Frame = +2

Query: 248 QVVGWPPVKTYRMNSLVNQAKFSKNEEEXXXXXXXXXXXXXXXXXXXEKMVK----ETGL 415
           QVVGWPP++ YRMNSLVNQAK ++ EE+                            E G 
Sbjct: 77  QVVGWPPIRAYRMNSLVNQAKAARAEEDKGIGEKDISKDNLKKKICNGNKTSAPSNEKGH 136

Query: 416 SGFVKVNMDGLPIGRKVDLNAHDCYETLAQALEIMFLKASASTTSLRREKQQAKQHSRLL 595
            GFVKVNMDG+PIGRKVDLNAH CYETLAQALE MF +++ +  S+  EK+Q  + S+LL
Sbjct: 137 LGFVKVNMDGIPIGRKVDLNAHACYETLAQALEEMFFRSATTINSIGGEKRQVTKPSKLL 196

Query: 596 DGSSEFVLTYEDKEGDWMLVGDVPWRMFLGTVKRLRIMKTSDANGLAPRYQEKNHKPKSK 775
           DG SEF+LTYEDKEGDWMLVGDVPW MFL +VKRLRIM+TS+ANGLAPR+Q++N K + K
Sbjct: 197 DGLSEFLLTYEDKEGDWMLVGDVPWGMFLNSVKRLRIMRTSEANGLAPRFQDRNEKQRIK 256

Query: 776 QV 781
            V
Sbjct: 257 PV 258


>ref|XP_002314509.1| predicted protein [Populus trichocarpa] gi|222863549|gb|EEF00680.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  209 bits (533), Expect = 7e-52
 Identities = 110/182 (60%), Positives = 130/182 (71%), Gaps = 4/182 (2%)
 Frame = +2

Query: 248 QVVGWPPVKTYRMNSLVNQAKFSKNEEEXXXXXXXXXXXXXXXXXXXEKMVKETGLS--- 418
           QVVGWPP++ YRMNSLV+QAK ++ EEE                         TG     
Sbjct: 96  QVVGWPPIRAYRMNSLVSQAKAARAEEEKGIGEKDKSKENLKKKICNGNKTNATGNEKGH 155

Query: 419 -GFVKVNMDGLPIGRKVDLNAHDCYETLAQALEIMFLKASASTTSLRREKQQAKQHSRLL 595
            GFVKVNMDG+PIGRKVDLNAH CYETLAQALE MF +++ +  S+  +K  +K  S+LL
Sbjct: 156 LGFVKVNMDGVPIGRKVDLNAHACYETLAQALEEMFFRSTTTINSIGGQKPLSK-FSKLL 214

Query: 596 DGSSEFVLTYEDKEGDWMLVGDVPWRMFLGTVKRLRIMKTSDANGLAPRYQEKNHKPKSK 775
           DGSSEFVLTYEDKEGDWMLVGDVPW MFL +VKRLRIM+TS+ANGLAPR Q++N K +SK
Sbjct: 215 DGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRLQDRNEKQRSK 274

Query: 776 QV 781
            V
Sbjct: 275 PV 276


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