BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028053
         (1233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an...   548   e-153
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ...   520   e-145
ref|XP_002300385.1| predicted protein [Populus trichocarpa] gi|2...   511   e-142
ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I an...   494   e-137
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an...   493   e-137

>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            [Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
            protein product [Vitis vinifera]
          Length = 372

 Score =  548 bits (1412), Expect = e-153
 Identities = 272/349 (77%), Positives = 313/349 (89%), Gaps = 2/349 (0%)
 Frame = -1

Query: 1188 KTRVSCNKDAPTNTENIHYSGAYAAMGVDNSLRLDEFRRNFKVKVIKLNEDDMEFDLIGI 1009
            +TRV CN DAPT+TEN+ YSGAY++MGVDNSLR+D+F  NF+V+VI+L+EDDMEFD+IGI
Sbjct: 25   RTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFCNNFRVEVIRLSEDDMEFDMIGI 84

Query: 1008 DASIANAFRRILISELPTMAIEKVLVANSSSVVQDEVLAHRLGLIPIKVDPRLFDYMSEN 829
            D SIANAFRRILI+ELPTMAIEKVL+AN++S+VQDEVLAHRLGLIPI  DPRLFD +SEN
Sbjct: 85   DPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDEVLAHRLGLIPINADPRLFDDLSEN 144

Query: 828  DVPNEKNSIVFKLHFKCERGSGERRTVYSHDLKWLPFGSEYVLPTESS-SDSTSKPKTYT 652
            D PNEKN+IVF LH +CERG G R TV S++LKWLP GSE+ L TE++ S STSKPKTYT
Sbjct: 145  DTPNEKNTIVFNLHVRCERG-GPRLTVKSNELKWLPHGSEFPLATENTTSSSTSKPKTYT 203

Query: 651  SFTSSQDSLPEFSNNPITVT-PGIIISKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWY 475
            SF+ SQDSLPEFS+  I    P III+KLGPGQEIELEAHAVKG+GKTHAKWSPVATAWY
Sbjct: 204  SFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWY 263

Query: 474  RMLPEVILLQDIEDEDAQELVKKCPVNVFDIEDMGKGRKRATVSRPRACTLCRECIREPG 295
            RMLPEV+LLQ+IEDE A+ELVKKCPVNVFDIED+ KG+K+ATV+RPRACTLCRECIR   
Sbjct: 264  RMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKGKKKATVARPRACTLCRECIRGDD 323

Query: 294  WEEKVALRRVKDHFIFTIESTGALPPEVLFTEAVKILEDKCERVITELS 148
            W++ VA+RRVK+HFIFTIESTGALPPEVLF EAVK+LEDKCERVITELS
Sbjct: 324  WDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVLEDKCERVITELS 372


>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
            communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
            polymerase I/III subunits, putative [Ricinus communis]
          Length = 374

 Score =  520 bits (1340), Expect = e-145
 Identities = 259/348 (74%), Positives = 303/348 (87%), Gaps = 1/348 (0%)
 Frame = -1

Query: 1188 KTRVSCNKDAPTNTENIHYSGAYAAMGVDNSLRLDEFRRNFKVKVIKLNEDDMEFDLIGI 1009
            +TRV C  DAP +T+NI YSGAYA++GVDNSL+LD FR NFKV+VI+L +DDMEFD+IGI
Sbjct: 35   RTRVVCKSDAPIHTDNIVYSGAYASIGVDNSLQLDCFRDNFKVEVIQLTKDDMEFDMIGI 94

Query: 1008 DASIANAFRRILISELPTMAIEKVLVANSSSVVQDEVLAHRLGLIPIKVDPRLFDYMSEN 829
            DA+IANAFRRILISELPTMAIEKVL+AN++S++QDEVLAHRLGLIPI  DPRLF+Y+S N
Sbjct: 95   DAAIANAFRRILISELPTMAIEKVLIANNTSLIQDEVLAHRLGLIPINADPRLFEYLSAN 154

Query: 828  DVPNEKNSIVFKLHFKCERGSGERRTVYSHDLKWLPFGSEYVLPTESSSDSTSKPKTYTS 649
            D PNEKN+IVFKLH  C+RG   RRTVYS +LKWLP GS+ +  +E +    SKP TYTS
Sbjct: 155  DTPNEKNTIVFKLHASCKRGE-PRRTVYSEELKWLPGGSQLLKESEKAD---SKPSTYTS 210

Query: 648  FTSSQDSLPEFSNNPITVTPG-IIISKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYR 472
            FT  QD +P+    P++ +   II++KLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYR
Sbjct: 211  FTDKQDFIPK----PVSPSEDKIIVAKLGPGQEIELEAHAVKGLGKTHAKWSPVATAWYR 266

Query: 471  MLPEVILLQDIEDEDAQELVKKCPVNVFDIEDMGKGRKRATVSRPRACTLCRECIREPGW 292
            MLPEV+LL+DIEDE A+EL KKCPVNVFDIED+G G+KRATV+RPRACTLCRECIR   W
Sbjct: 267  MLPEVVLLEDIEDEIAEELTKKCPVNVFDIEDIGNGKKRATVARPRACTLCRECIRGGEW 326

Query: 291  EEKVALRRVKDHFIFTIESTGALPPEVLFTEAVKILEDKCERVITELS 148
            +++V+LRRVKDHFIFTIESTGALPPEVLFTEAVK+LEDKCERVITELS
Sbjct: 327  DKRVSLRRVKDHFIFTIESTGALPPEVLFTEAVKVLEDKCERVITELS 374


>ref|XP_002300385.1| predicted protein [Populus trichocarpa] gi|222847643|gb|EEE85190.1|
            predicted protein [Populus trichocarpa]
          Length = 390

 Score =  511 bits (1315), Expect = e-142
 Identities = 251/347 (72%), Positives = 293/347 (84%), Gaps = 1/347 (0%)
 Frame = -1

Query: 1185 TRVSCNKDAPTNTENIHYSGAYAAMGVDNSLRLDEFRRNFKVKVIKLNEDDMEFDLIGID 1006
            TRV C  DAPTNTE + YSG+YA+MGVDNSLRLD FR NF++KVI L++D MEFD+IGID
Sbjct: 48   TRVYCKPDAPTNTETLQYSGSYASMGVDNSLRLDSFRENFRIKVIALDKDKMEFDMIGID 107

Query: 1005 ASIANAFRRILISELPTMAIEKVLVANSSSVVQDEVLAHRLGLIPIKVDPRLFDYMSEND 826
            A++ANAFRRILISE+PTMAIEKV +AN++SV+QDEVLAHRLGLIPIKVDPRLF+Y+S ND
Sbjct: 108  AAVANAFRRILISEVPTMAIEKVFIANNTSVIQDEVLAHRLGLIPIKVDPRLFEYLSAND 167

Query: 825  VPNEKNSIVFKLHFKCERGSGERRTVYSHDLKWLPFGSEYVLPTESSSDSTSKPKTYTSF 646
             PNEKN+IV KLH +C RG   R +VYS +LKWLP GSE+    + S    SKP TYTSF
Sbjct: 168  TPNEKNTIVLKLHARCNRGQ-PRCSVYSQELKWLPNGSEF---AKESEKPDSKPSTYTSF 223

Query: 645  TSSQDSLPEFSNNPITVTPGIIISKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRML 466
            +  QDSLPEF+ NPI+    II++KLGPGQEIELEAHAVKG+GKTHAKWSPV TAWYRM 
Sbjct: 224  SCGQDSLPEFAGNPISTVEDIILAKLGPGQEIELEAHAVKGMGKTHAKWSPVGTAWYRMF 283

Query: 465  PEVILLQDIEDEDAQELVKKCPVNVFDIEDMGKGRKRATVSRPRACTLCRECIR-EPGWE 289
            PEV+LL++I+ EDA+EL++KCP  VFDIED G  +K+A V+  RACTLCRECIR +  WE
Sbjct: 284  PEVVLLENIKGEDAEELIRKCPSGVFDIEDTGNAKKKAIVADSRACTLCRECIRGDEEWE 343

Query: 288  EKVALRRVKDHFIFTIESTGALPPEVLFTEAVKILEDKCERVITELS 148
            ++VAL RVKDHFIFTIESTGALPPEVLFTEAVKILE KCERVITELS
Sbjct: 344  KRVALHRVKDHFIFTIESTGALPPEVLFTEAVKILEAKCERVITELS 390


>ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
            [Cucumis sativus] gi|449522768|ref|XP_004168398.1|
            PREDICTED: DNA-directed RNA polymerases I and III subunit
            RPAC1-like [Cucumis sativus]
          Length = 391

 Score =  494 bits (1273), Expect = e-137
 Identities = 254/349 (72%), Positives = 295/349 (84%), Gaps = 2/349 (0%)
 Frame = -1

Query: 1188 KTRVSCNKDAPTNTENIHYSGAYAAMGVDNSLRLDEFRRNFKVKVIKLNEDDMEFDLIGI 1009
            +TRV C  DAP +T+ I YSGA+A+MG DNSLRLD FR NFK++VI L EDD+EFD+IGI
Sbjct: 47   RTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVIDLKEDDIEFDMIGI 106

Query: 1008 DASIANAFRRILISELPTMAIEKVLVANSSSVVQDEVLAHRLGLIPIKVDPRLFDYMSEN 829
            D ++ANAFRRILISE+PTMAIEKVL AN++S+VQDEVLAHRLGL+PI+VDPRLF Y S+ 
Sbjct: 107  DPALANAFRRILISEVPTMAIEKVLFANNTSIVQDEVLAHRLGLVPIRVDPRLFKY-SDK 165

Query: 828  DVPNEKNSIVFKLHFKCERGSGERRTVYSHDLKWLPFGSEYVLPTESSSDSTSKPKTYTS 649
            D PNE N+IVF+LH  CERG   R TV S  L WLP GSE+ L ++ S  S SKPKTYTS
Sbjct: 166  DAPNENNTIVFRLHACCERGK-PRLTVTSKALTWLPNGSEFPLVSDKSV-SNSKPKTYTS 223

Query: 648  FTSSQDSL-PEFSNNPI-TVTPGIIISKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWY 475
            F+ SQ++L  EFSNNPI      II+++LGPGQEIELEAHAVKG+GKTHAKWSPVATAWY
Sbjct: 224  FSCSQNTLSKEFSNNPIGPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWY 283

Query: 474  RMLPEVILLQDIEDEDAQELVKKCPVNVFDIEDMGKGRKRATVSRPRACTLCRECIREPG 295
            RMLPEV+L+++IEDE A+EL KKCPVNVFDIED+  G+KRATV+RPR CTLCRECIR   
Sbjct: 284  RMLPEVVLMEEIEDELAEELEKKCPVNVFDIEDIA-GKKRATVARPRDCTLCRECIRGDA 342

Query: 294  WEEKVALRRVKDHFIFTIESTGALPPEVLFTEAVKILEDKCERVITELS 148
            WE++VALRRVKDHFIF IESTGALPPEVLFTEAVKILEDKCER+I ELS
Sbjct: 343  WEKRVALRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS 391


>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
            [Glycine max]
          Length = 393

 Score =  493 bits (1268), Expect = e-137
 Identities = 254/351 (72%), Positives = 295/351 (84%), Gaps = 4/351 (1%)
 Frame = -1

Query: 1188 KTRVSCNKDAPTNTENIHYSGAYAAMGVDNSLRLDEFRRNFKVKVIKLNEDDMEFDLIGI 1009
            KTRV CN DAP +T+ + YSGAYA MGVDNS+RLD F  NFKV+V +L + D+EFD+IGI
Sbjct: 46   KTRVLCNNDAPVHTDTVQYSGAYAIMGVDNSVRLDSFCENFKVEVKRLTDSDIEFDMIGI 105

Query: 1008 DASIANAFRRILISELPTMAIEKVLVANSSSVVQDEVLAHRLGLIPIKVDPRLFDY-MSE 832
            D +IANAFRRILI+E+PTMAIE+V +AN++SVVQDEVL+HRLGLIPI+ DPRLF+Y  + 
Sbjct: 106  DPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHRLGLIPIRADPRLFEYPENA 165

Query: 831  NDVPNEKNSIVFKLHFKCERGSGERRTVYSHDLKWLPFGSEYVLPTES-SSDSTSKPKTY 655
             D  NEKN+IVFKLH +C+ G   R TV S  LKWLP GSE  LP E    ++ SKPKT+
Sbjct: 166  GDDKNEKNTIVFKLHVRCQVGQ-PRITVKSDKLKWLPNGSE--LPCEDVKPNAGSKPKTF 222

Query: 654  TSFTSSQDSLPEFSNNPITVT-PGIIISKLGPGQEIELEAHAVKGIGKTHAKWSPVATAW 478
            TSFT SQDSLPEFSNN I +T   II++KLGPGQEIELEAHAVKG GKTHAKWSPVAT W
Sbjct: 223  TSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEAHAVKGTGKTHAKWSPVATTW 282

Query: 477  YRMLPEVILLQDIEDEDAQELVKKCPVNVFDIEDMGKGRKRATVSRPRACTLCRECIR-E 301
            YRMLPEV+LL+D+EDE A+EL  KCPVNVFDIED+GKG++RA V+RPR CTLCRECIR  
Sbjct: 283  YRMLPEVVLLKDVEDELAEELKNKCPVNVFDIEDIGKGKRRAKVARPRDCTLCRECIRGG 342

Query: 300  PGWEEKVALRRVKDHFIFTIESTGALPPEVLFTEAVKILEDKCERVITELS 148
              WE++V+LRRVK+HFIFTIESTGALPPEVLFTEAVKILEDKCERVITELS
Sbjct: 343  KEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCERVITELS 393