BLASTX nr result

ID: Atractylodes21_contig00028007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028007
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_198669.1| tryptophan synthase beta chain [Arabidopsis tha...   124   8e-27
ref|XP_002870836.1| hypothetical protein ARALYDRAFT_494122 [Arab...   124   8e-27
ref|XP_002329254.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002279124.2| PREDICTED: tryptophan synthase beta chain 2 ...   121   5e-26
emb|CBI16881.3| unnamed protein product [Vitis vinifera]              121   5e-26

>ref|NP_198669.1| tryptophan synthase beta chain [Arabidopsis thaliana]
           gi|10176821|dbj|BAB10143.1| tryptophan synthase beta
           chain [Arabidopsis thaliana] gi|19699005|gb|AAL91238.1|
           tryptophan synthase beta chain [Arabidopsis thaliana]
           gi|23198094|gb|AAN15574.1| tryptophan synthase beta
           chain [Arabidopsis thaliana] gi|332006948|gb|AED94331.1|
           tryptophan synthase beta chain [Arabidopsis thaliana]
          Length = 506

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/67 (89%), Positives = 64/67 (95%)
 Frame = +1

Query: 1   HPSPSNLTESGRRILEMDPLSPGSLGIAISEAVEVAALNEDTKYCLGSVLNHVLLHQTVI 180
           HPSPS+LTE+GRRILE DP SPGSLGIAISEAVEVAA NEDTKYCLGSVLNHVLLHQT+I
Sbjct: 236 HPSPSDLTEAGRRILESDPSSPGSLGIAISEAVEVAARNEDTKYCLGSVLNHVLLHQTII 295

Query: 181 GEECIKQ 201
           GEECI+Q
Sbjct: 296 GEECIQQ 302


>ref|XP_002870836.1| hypothetical protein ARALYDRAFT_494122 [Arabidopsis lyrata subsp.
           lyrata] gi|297316672|gb|EFH47095.1| hypothetical protein
           ARALYDRAFT_494122 [Arabidopsis lyrata subsp. lyrata]
          Length = 507

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/67 (89%), Positives = 64/67 (95%)
 Frame = +1

Query: 1   HPSPSNLTESGRRILEMDPLSPGSLGIAISEAVEVAALNEDTKYCLGSVLNHVLLHQTVI 180
           HPSPS+LTE+GRRILE DP SPGSLGIAISEAVEVAA NEDTKYCLGSVLNHVLLHQT+I
Sbjct: 237 HPSPSDLTEAGRRILESDPSSPGSLGIAISEAVEVAARNEDTKYCLGSVLNHVLLHQTII 296

Query: 181 GEECIKQ 201
           GEECI+Q
Sbjct: 297 GEECIQQ 303


>ref|XP_002329254.1| predicted protein [Populus trichocarpa] gi|222870708|gb|EEF07839.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/67 (89%), Positives = 64/67 (95%)
 Frame = +1

Query: 1   HPSPSNLTESGRRILEMDPLSPGSLGIAISEAVEVAALNEDTKYCLGSVLNHVLLHQTVI 180
           HPSPS++TE+GRRIL+MDP SPGSLGIAISEAVEVAA N DTKYCLGSVLNHVLLHQTVI
Sbjct: 192 HPSPSSITETGRRILQMDPSSPGSLGIAISEAVEVAAKNADTKYCLGSVLNHVLLHQTVI 251

Query: 181 GEECIKQ 201
           GEECIKQ
Sbjct: 252 GEECIKQ 258


>ref|XP_002279124.2| PREDICTED: tryptophan synthase beta chain 2 [Vitis vinifera]
          Length = 483

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = +1

Query: 1   HPSPSNLTESGRRILEMDPLSPGSLGIAISEAVEVAALNEDTKYCLGSVLNHVLLHQTVI 180
           HPSPS++TE+GR+IL+M+P SPGSLGIAISEAVEVAA N DTKYCLGSVLNHVLLHQTVI
Sbjct: 212 HPSPSSITEAGRKILQMNPSSPGSLGIAISEAVEVAAANADTKYCLGSVLNHVLLHQTVI 271

Query: 181 GEECIKQ 201
           GEECIKQ
Sbjct: 272 GEECIKQ 278


>emb|CBI16881.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = +1

Query: 1   HPSPSNLTESGRRILEMDPLSPGSLGIAISEAVEVAALNEDTKYCLGSVLNHVLLHQTVI 180
           HPSPS++TE+GR+IL+M+P SPGSLGIAISEAVEVAA N DTKYCLGSVLNHVLLHQTVI
Sbjct: 224 HPSPSSITEAGRKILQMNPSSPGSLGIAISEAVEVAAANADTKYCLGSVLNHVLLHQTVI 283

Query: 181 GEECIKQ 201
           GEECIKQ
Sbjct: 284 GEECIKQ 290