BLASTX nr result

ID: Atractylodes21_contig00027966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027966
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610900.1| Pentatricopeptide repeat-containing protein ...   169   3e-40
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   164   7e-39
ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-39
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   164   7e-39
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39

>ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355512235|gb|AES93858.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1508

 Score =  169 bits (427), Expect = 3e-40
 Identities = 83/113 (73%), Positives = 95/113 (84%)
 Frame = -2

Query: 340  MMRDGPSPTVESVNGLMQALIVDGRLNELYVVVQELQDMGLKISKNSIVLMLDAFTQAGN 161
            MMR+GPSPTVESVNGL+QALIVDGRL+ELYVV+QELQDM LKISK+SI+LML+AF QAGN
Sbjct: 850  MMREGPSPTVESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSILLMLEAFAQAGN 909

Query: 160  VFEVKKIYHGMKAAGYFPTMHLYRLMIGLLCRVKHXXXXXXXXXXXXXVGFRP 2
            +FEV+K+Y+GMKAAGYFPTMHLYRLMIGLLCR K               GF+P
Sbjct: 910  LFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKP 962


>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  164 bits (415), Expect = 7e-39
 Identities = 80/94 (85%), Positives = 87/94 (92%)
 Frame = -2

Query: 340  MMRDGPSPTVESVNGLMQALIVDGRLNELYVVVQELQDMGLKISKNSIVLMLDAFTQAGN 161
            MMRDGPSPTV+SVNGLMQALIVDGRL+ELYVV+QELQDMG KISK+SI LMLDAF  AGN
Sbjct: 808  MMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGN 867

Query: 160  VFEVKKIYHGMKAAGYFPTMHLYRLMIGLLCRVK 59
            +FEVKKIY GMKAAGYFPTMHLYR+MIGLL + K
Sbjct: 868  IFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGK 901


>ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|222837354|gb|EEE75733.1|
            predicted protein [Populus trichocarpa]
          Length = 1450

 Score =  164 bits (415), Expect = 7e-39
 Identities = 80/113 (70%), Positives = 92/113 (81%)
 Frame = -2

Query: 340  MMRDGPSPTVESVNGLMQALIVDGRLNELYVVVQELQDMGLKISKNSIVLMLDAFTQAGN 161
            MM+DGPSPTV+S+NGL+QALIVDGRL ELYVVVQELQD+G KISK+SI+LMLDAF +AGN
Sbjct: 841  MMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGN 900

Query: 160  VFEVKKIYHGMKAAGYFPTMHLYRLMIGLLCRVKHXXXXXXXXXXXXXVGFRP 2
            +FEVKKIYHGMKAAGYFP+MHLYR+M  LLCR K               GF+P
Sbjct: 901  IFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKP 953


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  164 bits (415), Expect = 7e-39
 Identities = 80/94 (85%), Positives = 87/94 (92%)
 Frame = -2

Query: 340  MMRDGPSPTVESVNGLMQALIVDGRLNELYVVVQELQDMGLKISKNSIVLMLDAFTQAGN 161
            MMRDGPSPTV+SVNGLMQALIVDGRL+ELYVV+QELQDMG KISK+SI LMLDAF  AGN
Sbjct: 840  MMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGN 899

Query: 160  VFEVKKIYHGMKAAGYFPTMHLYRLMIGLLCRVK 59
            +FEVKKIY GMKAAGYFPTMHLYR+MIGLL + K
Sbjct: 900  IFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGK 933


>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
            predicted protein [Populus trichocarpa]
          Length = 1480

 Score =  164 bits (414), Expect = 9e-39
 Identities = 81/113 (71%), Positives = 92/113 (81%)
 Frame = -2

Query: 340  MMRDGPSPTVESVNGLMQALIVDGRLNELYVVVQELQDMGLKISKNSIVLMLDAFTQAGN 161
            MMRDGPSPTV+++NGL+QALIVDGRL+ELYVVVQELQDMG KISK+SI+LMLDAF +AGN
Sbjct: 839  MMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGN 898

Query: 160  VFEVKKIYHGMKAAGYFPTMHLYRLMIGLLCRVKHXXXXXXXXXXXXXVGFRP 2
            +FEVKKIYHGMKAAGYFPTMHLYR+M  LL R K               GF+P
Sbjct: 899  IFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKP 951


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