BLASTX nr result

ID: Atractylodes21_contig00027962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027962
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   145   4e-33
emb|CBI20740.3| unnamed protein product [Vitis vinifera]              145   4e-33
emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]   145   4e-33
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h...   127   7e-28
ref|XP_002324204.1| dicer-like protein [Populus trichocarpa] gi|...   127   1e-27

>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/96 (71%), Positives = 77/96 (80%)
 Frame = +2

Query: 2   ECKMTLPPNAPFQTITGPPCKTSHLSKQLVCLEACKRLHQMGALTDHLVPYSGDPSGNKS 181
           ECK+TLPPNA FQTI GP  K SHLSKQLVCLEACK+LHQMGAL DHL+PY  +PS N  
Sbjct: 619 ECKLTLPPNAAFQTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDI 678

Query: 182 FKNTKEPSSGAGTTKRKELHGTTSIHALSGTWGDKL 289
              +K  ++GAGTTKRKELHGTT   ALSGTWGDK+
Sbjct: 679 IVKSKGSAAGAGTTKRKELHGTTQTCALSGTWGDKI 714


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/96 (71%), Positives = 77/96 (80%)
 Frame = +2

Query: 2   ECKMTLPPNAPFQTITGPPCKTSHLSKQLVCLEACKRLHQMGALTDHLVPYSGDPSGNKS 181
           ECK+TLPPNA FQTI GP  K SHLSKQLVCLEACK+LHQMGAL DHL+PY  +PS N  
Sbjct: 627 ECKLTLPPNAAFQTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDI 686

Query: 182 FKNTKEPSSGAGTTKRKELHGTTSIHALSGTWGDKL 289
              +K  ++GAGTTKRKELHGTT   ALSGTWGDK+
Sbjct: 687 IVKSKGSAAGAGTTKRKELHGTTQTCALSGTWGDKI 722


>emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
          Length = 2076

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/96 (71%), Positives = 77/96 (80%)
 Frame = +2

Query: 2    ECKMTLPPNAPFQTITGPPCKTSHLSKQLVCLEACKRLHQMGALTDHLVPYSGDPSGNKS 181
            ECK+TLPPNA FQTI GP  K SHLSKQLVCLEACK+LHQMGAL DHL+PY  +PS N  
Sbjct: 1628 ECKLTLPPNAAFQTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDI 1687

Query: 182  FKNTKEPSSGAGTTKRKELHGTTSIHALSGTWGDKL 289
               +K  ++GAGTTKRKELHGTT   ALSGTWGDK+
Sbjct: 1688 IVKSKGSAAGAGTTKRKELHGTTQTCALSGTWGDKI 1723


>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/99 (62%), Positives = 72/99 (72%), Gaps = 4/99 (4%)
 Frame = +2

Query: 2   ECKMTLPPNAPFQTITGPPCKTSHLSKQLVCLEACKRLHQMGALTDHLVPYSGDPSGNKS 181
           +CK+TLP NA  QTI GPP + SHL+KQLVCLEACK+LHQMGAL DHL P   +PS N  
Sbjct: 620 KCKLTLPVNAAVQTIVGPPSRNSHLAKQLVCLEACKQLHQMGALDDHLTPSIEEPSENAC 679

Query: 182 FKNTKE----PSSGAGTTKRKELHGTTSIHALSGTWGDK 286
               K+      +GAGTTKRKELHGTT I AL G+WG+K
Sbjct: 680 ISKGKDSGAGAGAGAGTTKRKELHGTTCIQALCGSWGEK 718


>ref|XP_002324204.1| dicer-like protein [Populus trichocarpa]
           gi|222865638|gb|EEF02769.1| dicer-like protein [Populus
           trichocarpa]
          Length = 1492

 Score =  127 bits (319), Expect = 1e-27
 Identities = 61/92 (66%), Positives = 72/92 (78%)
 Frame = +2

Query: 14  TLPPNAPFQTITGPPCKTSHLSKQLVCLEACKRLHQMGALTDHLVPYSGDPSGNKSFKNT 193
           +LPPNA FQT+ GP C+   L+KQLVCLEACK+LHQMGAL DHL+P   +PS     K +
Sbjct: 492 SLPPNAAFQTLVGPTCRNQQLAKQLVCLEACKKLHQMGALDDHLLPSVEEPSEIAVVK-S 550

Query: 194 KEPSSGAGTTKRKELHGTTSIHALSGTWGDKL 289
           K  S+GAGTTKRKELHGT  IHALSG+WG+KL
Sbjct: 551 KSTSAGAGTTKRKELHGTACIHALSGSWGEKL 582


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