BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027952
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   106   2e-21
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   105   3e-21
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   103   2e-20
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   103   2e-20
ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding...   102   3e-20

>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  106 bits (264), Expect = 2e-21
 Identities = 49/99 (49%), Positives = 70/99 (70%)
 Frame = +3

Query: 3    KTDPSLFILNSSGSLVYLLVYVDDIIITGTNSTVVASIIQKLDSLFALKDMGQLHYFVGV 182
            K D SLFI N+  + +Y+LVYVDDIIITG++   + +++ KL   FA+KD+G LHYF+G+
Sbjct: 1098 KADVSLFIYNAHSTAIYILVYVDDIIITGSSPHAIDNVLAKLKDDFAIKDLGDLHYFLGI 1157

Query: 183  EVVHKGSDLVLSQRKYVREILHCACLADCKPISTPMSTS 299
            EV  KG  L+L Q KY R++L    +  CKP+ TP++TS
Sbjct: 1158 EVHRKGDGLLLCQEKYARDLLKRVGMECCKPVHTPVATS 1196


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1256

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/99 (48%), Positives = 68/99 (68%)
 Frame = +3

Query: 3    KTDPSLFILNSSGSLVYLLVYVDDIIITGTNSTVVASIIQKLDSLFALKDMGQLHYFVGV 182
            K D SLF  N  G ++++LVYVDDII+  +    V ++++ L   FALKD+G LHYF+G+
Sbjct: 921  KADTSLFFYNKGGLIIFVLVYVDDIIVASSRQDAVPALLKDLQKDFALKDLGDLHYFLGI 980

Query: 183  EVVHKGSDLVLSQRKYVREILHCACLADCKPISTPMSTS 299
            EV    S +VL+Q KYV ++L    + DCKP+STP+STS
Sbjct: 981  EVNKASSGIVLTQEKYVTDLLRRVGMTDCKPVSTPLSTS 1019


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  103 bits (256), Expect = 2e-20
 Identities = 46/99 (46%), Positives = 69/99 (69%)
 Frame = +3

Query: 3    KTDPSLFILNSSGSLVYLLVYVDDIIITGTNSTVVASIIQKLDSLFALKDMGQLHYFVGV 182
            K D SLF  N  G ++++L+YVDDII+T +    V++++Q L   FALKD+G LHYF+G+
Sbjct: 1112 KGDTSLFFYNKGGLIIFVLIYVDDIIVTSSRQEAVSALLQDLKKEFALKDLGDLHYFLGI 1171

Query: 183  EVVHKGSDLVLSQRKYVREILHCACLADCKPISTPMSTS 299
            EV     +++L+Q KY  ++L    + DCKP+STP+STS
Sbjct: 1172 EVNKVTDEIILTQDKYACDLLRRVNMFDCKPVSTPLSTS 1210


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  103 bits (256), Expect = 2e-20
 Identities = 46/99 (46%), Positives = 67/99 (67%)
 Frame = +3

Query: 3    KTDPSLFILNSSGSLVYLLVYVDDIIITGTNSTVVASIIQKLDSLFALKDMGQLHYFVGV 182
            K D SLF  N    ++++L+YVDDII+T +    V ++++ L   FALKD+G LHYF+G+
Sbjct: 912  KADTSLFFYNKGDLIIFVLIYVDDIIVTSSRQEAVPALLRDLQKEFALKDLGDLHYFLGI 971

Query: 183  EVVHKGSDLVLSQRKYVREILHCACLADCKPISTPMSTS 299
            EV      +VL+Q KYV ++L    + DCKP+STP+STS
Sbjct: 972  EVTKVSGGIVLTQDKYVNDLLRRVNMFDCKPVSTPLSTS 1010


>ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
           [Glycine max]
          Length = 1482

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/100 (50%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   KTDPSLFILNSSGSLVYLLVYVDDIIITGTNSTVVASIIQKLDSLFALKDMGQLHYFVGV 182
           K DPSLFIL    ++VYLLVYVDDI I G+++ ++ S++  L+S FALK +GQL YF+G+
Sbjct: 401 KCDPSLFILKKDRNVVYLLVYVDDINIIGSSNYLIKSLVSHLNSTFALKQLGQLDYFLGI 460

Query: 183 EVVHKGS-DLVLSQRKYVREILHCACLADCKPISTPMSTS 299
           EV H  +  ++L+Q KY+ ++LH   +A+ KPIS+PM T+
Sbjct: 461 EVHHTPTGSVLLTQSKYIHDLLHKTDMAEAKPISSPMVTN 500



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/59 (44%), Positives = 36/59 (61%)
 Frame = +3

Query: 69  DDIIITGTNSTVVASIIQKLDSLFALKDMGQLHYFVGVEVVHKGSDLVLSQRKYVREIL 245
           DDI+ITG +   V  +   L   F  KD+GQL Y +G+EV    + + +SQRKY R+IL
Sbjct: 604 DDIVITGDDHRGVRDLKNHLSQHFQTKDLGQLKYLLGIEVTQSKTSVAISQRKYARDIL 662