BLASTX nr result

ID: Atractylodes21_contig00027932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027932
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316319.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002530968.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
gb|AFK37594.1| unknown [Lotus japonicus]                               57   2e-06

>ref|XP_002316319.1| predicted protein [Populus trichocarpa] gi|222865359|gb|EEF02490.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 50/108 (46%), Positives = 59/108 (54%)
 Frame = -2

Query: 347 NLTSLACSFLLLFSTINPSLSARTIAGLXXXXXXXPWSRHHKTMTFYMPNVLNSSLQHPP 168
           ++ SL CS LL  + IN S  AR++              HHK +TF M NVLN  + HP 
Sbjct: 6   SMLSLVCS-LLCMNIINRSSFARSLGNSSPGQHHHH--NHHKKITFLMQNVLN--VTHPL 60

Query: 167 TTPPTTKVNGQPIPFSKPLGLFPPVGGIPVSDSNSIPSQTFGLSDSAI 24
             P TTKV  Q IPF KPLG FPP GGIP+   N+  S T GLS   I
Sbjct: 61  PKPATTKVTSQ-IPFPKPLGYFPPSGGIPLQQPNAAVSGT-GLSTQTI 106


>ref|XP_002530968.1| conserved hypothetical protein [Ricinus communis]
           gi|223529444|gb|EEF31403.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 225

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
 Frame = -2

Query: 227 HKTMTFYMPNVLNSSLQHPPTTPPTTKVNGQPIPFSKPLGLFPPVGGIPVSDSN------ 66
           H  +TF M NVLN  +  P   P TT+ +   IPF KPLG FPP GGIP+  SN      
Sbjct: 34  HPKITFLMQNVLN--VTRPSQKPATTEFSSL-IPFPKPLGYFPPNGGIPLPQSNPTVPIT 90

Query: 65  SIPSQTFGLSDSAI 24
            +P+ TF  SD  +
Sbjct: 91  GLPTHTFDFSDMGL 104


>gb|AFK37594.1| unknown [Lotus japonicus]
          Length = 192

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/45 (60%), Positives = 32/45 (71%)
 Frame = -2

Query: 170 PTTPPTTKVNGQPIPFSKPLGLFPPVGGIPVSDSNSIPSQTFGLS 36
           P+  PTTKV G+ IPF KPLG FPP+GGIP+  S S  +QT  LS
Sbjct: 10  PSENPTTKVTGK-IPFPKPLGFFPPIGGIPIPQSTSSSTQTLDLS 53


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