BLASTX nr result

ID: Atractylodes21_contig00027930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027930
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...   196   1e-48
emb|CBI36629.3| unnamed protein product [Vitis vinifera]              188   3e-46
ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit...   188   3e-46
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]   188   3e-46
ref|XP_002309383.1| predicted protein [Populus trichocarpa] gi|2...   181   6e-44

>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score =  196 bits (499), Expect = 1e-48
 Identities = 98/150 (65%), Positives = 112/150 (74%), Gaps = 3/150 (2%)
 Frame = +3

Query: 66  LSPYERPYFFSQXXXXXX---LIPATGFGSNLNNKVSPSVXXXXXXXXXXXXXXXXXHLL 236
           LSP ++PYF SQ         L  ++  G NLN+K+SPSV                 HLL
Sbjct: 14  LSPSQQPYFLSQPPPQQQNNNLDGSSSDGFNLNSKISPSVLLIIIILAIIFFVSGLLHLL 73

Query: 237 VRFLVKPSNRDPDEFDNVTALQGQLQQLFTLHDSGVDQSFIDTLPVFTYKSIIGVKNPFD 416
           VRFL++P NRDPD+ DNVTALQGQLQQLF LHD+GVDQSFIDTLPVF YK+IIG+KNPFD
Sbjct: 74  VRFLLRPPNRDPDDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFHYKAIIGLKNPFD 133

Query: 417 CAVCLCEFEGDDKLRLLPKCSHAFHMDCID 506
           CAVCLCEFE +DKLRLLPKCSHAFHM+CID
Sbjct: 134 CAVCLCEFEPEDKLRLLPKCSHAFHMECID 163


>emb|CBI36629.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  188 bits (478), Expect = 3e-46
 Identities = 97/164 (59%), Positives = 111/164 (67%), Gaps = 3/164 (1%)
 Frame = +3

Query: 24  NLSKFSQEMDRKILLSPYERPYFFSQXXXXXXLIPATGFGS---NLNNKVSPSVXXXXXX 194
           N+     ++  K   SP E P F SQ        P   F S   NLN+KVSPS+      
Sbjct: 45  NMDSVLFQIQEKAFNSPSESPAFLSQSPP-----PPANFQSGDYNLNSKVSPSILLIIII 99

Query: 195 XXXXXXXXXXXHLLVRFLVKPSNRDPDEFDNVTALQGQLQQLFTLHDSGVDQSFIDTLPV 374
                      HLLVRFL++  NR+P++ DNVTALQGQLQQLF LHD+GVDQSFIDTLPV
Sbjct: 100 LAIIFFVSGLLHLLVRFLLRQPNREPEDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPV 159

Query: 375 FTYKSIIGVKNPFDCAVCLCEFEGDDKLRLLPKCSHAFHMDCID 506
           F YK+IIG KNPFDCAVCLCEFE +DKLRLLPKCSHAFHM+CID
Sbjct: 160 FLYKAIIGAKNPFDCAVCLCEFEAEDKLRLLPKCSHAFHMECID 203


>ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera]
          Length = 543

 Score =  188 bits (478), Expect = 3e-46
 Identities = 97/164 (59%), Positives = 111/164 (67%), Gaps = 3/164 (1%)
 Frame = +3

Query: 24  NLSKFSQEMDRKILLSPYERPYFFSQXXXXXXLIPATGFGS---NLNNKVSPSVXXXXXX 194
           N+     ++  K   SP E P F SQ        P   F S   NLN+KVSPS+      
Sbjct: 45  NMDSVLFQIQEKAFNSPSESPAFLSQSPP-----PPANFQSGDYNLNSKVSPSILLIIII 99

Query: 195 XXXXXXXXXXXHLLVRFLVKPSNRDPDEFDNVTALQGQLQQLFTLHDSGVDQSFIDTLPV 374
                      HLLVRFL++  NR+P++ DNVTALQGQLQQLF LHD+GVDQSFIDTLPV
Sbjct: 100 LAIIFFVSGLLHLLVRFLLRQPNREPEDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPV 159

Query: 375 FTYKSIIGVKNPFDCAVCLCEFEGDDKLRLLPKCSHAFHMDCID 506
           F YK+IIG KNPFDCAVCLCEFE +DKLRLLPKCSHAFHM+CID
Sbjct: 160 FLYKAIIGAKNPFDCAVCLCEFEAEDKLRLLPKCSHAFHMECID 203


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score =  188 bits (478), Expect = 3e-46
 Identities = 97/164 (59%), Positives = 111/164 (67%), Gaps = 3/164 (1%)
 Frame = +3

Query: 24  NLSKFSQEMDRKILLSPYERPYFFSQXXXXXXLIPATGFGS---NLNNKVSPSVXXXXXX 194
           N+     ++  K   SP E P F SQ        P   F S   NLN+KVSPS+      
Sbjct: 45  NMDSVLFQIQEKAFNSPSESPAFLSQPPP-----PPANFQSGDYNLNSKVSPSILLIIII 99

Query: 195 XXXXXXXXXXXHLLVRFLVKPSNRDPDEFDNVTALQGQLQQLFTLHDSGVDQSFIDTLPV 374
                      HLLVRFL++  NR+P++ DNVTALQGQLQQLF LHD+GVDQSFIDTLPV
Sbjct: 100 LAIIFFVSGLLHLLVRFLLRQPNREPEDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPV 159

Query: 375 FTYKSIIGVKNPFDCAVCLCEFEGDDKLRLLPKCSHAFHMDCID 506
           F YK+IIG KNPFDCAVCLCEFE +DKLRLLPKCSHAFHM+CID
Sbjct: 160 FLYKAIIGAKNPFDCAVCLCEFEAEDKLRLLPKCSHAFHMECID 203


>ref|XP_002309383.1| predicted protein [Populus trichocarpa] gi|222855359|gb|EEE92906.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score =  181 bits (459), Expect = 6e-44
 Identities = 92/148 (62%), Positives = 109/148 (73%), Gaps = 1/148 (0%)
 Frame = +3

Query: 66  LSPYERPYFFSQXXXXXXLIPATGFGSNLNNKVSPSVXXXXXXXXXXXXXXXXXHLLVRF 245
           +SP ++PYF SQ      L    GF  NLN KVSPS+                 HLLVRF
Sbjct: 14  ISPTQQPYFLSQPPPQPNL-DTDGF--NLNTKVSPSLLLIIIILAIIFFVSGLLHLLVRF 70

Query: 246 LVKPSNRD-PDEFDNVTALQGQLQQLFTLHDSGVDQSFIDTLPVFTYKSIIGVKNPFDCA 422
           L++P NR+ PD+ ++VTALQGQLQQLF LHD+GVDQ+FID LPVF YK+IIG+KNPFDCA
Sbjct: 71  LLRPRNREYPDDLESVTALQGQLQQLFHLHDAGVDQTFIDALPVFQYKAIIGLKNPFDCA 130

Query: 423 VCLCEFEGDDKLRLLPKCSHAFHMDCID 506
           VCLCEFE +D+LRLLPKCSHAFHM+CID
Sbjct: 131 VCLCEFEPEDQLRLLPKCSHAFHMECID 158


Top