BLASTX nr result

ID: Atractylodes21_contig00027923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027923
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   347   1e-93
ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   343   2e-92
ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation spec...   337   1e-90
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec...   337   1e-90
ref|NP_001063107.1| Os09g0397900 [Oryza sativa Japonica Group] g...   336   2e-90

>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223534732|gb|EEF36424.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 963

 Score =  347 bits (890), Expect = 1e-93
 Identities = 174/200 (87%), Positives = 183/200 (91%), Gaps = 1/200 (0%)
 Frame = +1

Query: 1   FTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVGR-GEEEQFTYENILDCMKKVTAVDLK 177
           FTEVCGYNGP+YMTYPTKAL+PLMLEDYRKVMV R GEEEQFT ++I  C+ KV AVDLK
Sbjct: 79  FTEVCGYNGPVYMTYPTKALSPLMLEDYRKVMVDRRGEEEQFTADHIKQCLNKVIAVDLK 138

Query: 178 QTVQVDKDLQIRAYYAGHVLGAAMFYASVGDAAMVYTGDYNMTPDRHLGAAQIDRLQLDV 357
           QTVQVDKDLQIRAYYAGHVLGAAMFYA VGD+AMVYTGDYNMTPDRHLGAAQIDRLQLD+
Sbjct: 139 QTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDSAMVYTGDYNMTPDRHLGAAQIDRLQLDL 198

Query: 358 LITESTYATTIRDSKYAREREFLKAVHKCVANGGKVLIPTFALGRAQELCILLDDYGEWM 537
           LITESTYATTIRDSKYAREREFLK VHKCVA GGKVLIPTFALGRAQELC+LLDDY E M
Sbjct: 199 LITESTYATTIRDSKYAREREFLKVVHKCVAGGGKVLIPTFALGRAQELCLLLDDYWERM 258

Query: 538 NLKVPIYFSAGLVSCAFICY 597
           NLKVPIYFSAGL   A + Y
Sbjct: 259 NLKVPIYFSAGLTIQANMYY 278


>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score =  343 bits (880), Expect = 2e-92
 Identities = 174/200 (87%), Positives = 183/200 (91%), Gaps = 1/200 (0%)
 Frame = +1

Query: 1   FTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVGR-GEEEQFTYENILDCMKKVTAVDLK 177
           FTEVCGYNGPIYMTYPTKALAPLMLED+RKV+V R GEEEQFT  +I  CM+KV AVDLK
Sbjct: 79  FTEVCGYNGPIYMTYPTKALAPLMLEDFRKVLVDRRGEEEQFTSLHISQCMEKVIAVDLK 138

Query: 178 QTVQVDKDLQIRAYYAGHVLGAAMFYASVGDAAMVYTGDYNMTPDRHLGAAQIDRLQLDV 357
           QTVQVD DLQIRAYYAGHVLGAAMFYA VGD+AMVYTGDYNMTPDRHLGAAQIDRL+LD+
Sbjct: 139 QTVQVDDDLQIRAYYAGHVLGAAMFYAKVGDSAMVYTGDYNMTPDRHLGAAQIDRLELDL 198

Query: 358 LITESTYATTIRDSKYAREREFLKAVHKCVANGGKVLIPTFALGRAQELCILLDDYGEWM 537
           LITESTYATTIRDSKYAREREFLKAVH+CVA GGKVLIPTFALGRAQELCILLDDY E M
Sbjct: 199 LITESTYATTIRDSKYAREREFLKAVHECVAGGGKVLIPTFALGRAQELCILLDDYWERM 258

Query: 538 NLKVPIYFSAGLVSCAFICY 597
           NLKVPIYFSAGL   A + Y
Sbjct: 259 NLKVPIYFSAGLTIQANLYY 278


>ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Brachypodium distachyon]
          Length = 553

 Score =  337 bits (864), Expect = 1e-90
 Identities = 169/200 (84%), Positives = 183/200 (91%), Gaps = 1/200 (0%)
 Frame = +1

Query: 1   FTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVG-RGEEEQFTYENILDCMKKVTAVDLK 177
           FTEVCGY+GPIYMTYPTKALAPLMLEDYRKVMV  RGEEEQ++YE+IL CMKKV  VDLK
Sbjct: 83  FTEVCGYHGPIYMTYPTKALAPLMLEDYRKVMVDQRGEEEQYSYEDILRCMKKVIPVDLK 142

Query: 178 QTVQVDKDLQIRAYYAGHVLGAAMFYASVGDAAMVYTGDYNMTPDRHLGAAQIDRLQLDV 357
           QT+QV++DL IRAYYAGHVLGAAM YA VGDAAMVYTGDYNMTPDRHLGAAQI+RL+LD+
Sbjct: 143 QTIQVNRDLVIRAYYAGHVLGAAMVYAKVGDAAMVYTGDYNMTPDRHLGAAQIERLKLDL 202

Query: 358 LITESTYATTIRDSKYAREREFLKAVHKCVANGGKVLIPTFALGRAQELCILLDDYGEWM 537
           LITESTYA TIRDSK+AREREFLKAVHKCV+ GGKVLIPTFALGRAQELCILLDDY E M
Sbjct: 203 LITESTYAKTIRDSKHAREREFLKAVHKCVSEGGKVLIPTFALGRAQELCILLDDYWERM 262

Query: 538 NLKVPIYFSAGLVSCAFICY 597
           NLK+PIYFSAGL   A + Y
Sbjct: 263 NLKIPIYFSAGLTIQANMYY 282


>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Cucumis sativus]
          Length = 649

 Score =  337 bits (863), Expect = 1e-90
 Identities = 167/200 (83%), Positives = 181/200 (90%), Gaps = 1/200 (0%)
 Frame = +1

Query: 1   FTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVGR-GEEEQFTYENILDCMKKVTAVDLK 177
           FTEVCGYNGPIYMTYPT ALAP+ LEDYRKVMV R GE EQFT ++I++C+KKV  VDLK
Sbjct: 79  FTEVCGYNGPIYMTYPTMALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLK 138

Query: 178 QTVQVDKDLQIRAYYAGHVLGAAMFYASVGDAAMVYTGDYNMTPDRHLGAAQIDRLQLDV 357
           QT+QVD+DLQIRAYYAGHVLGAAMFYA VGDAAMVYTGDYNMTPDRHLGAAQIDR+QLD+
Sbjct: 139 QTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDL 198

Query: 358 LITESTYATTIRDSKYAREREFLKAVHKCVANGGKVLIPTFALGRAQELCILLDDYGEWM 537
           LITESTYATTIRDSKYAREREFLKAVH C+A+GGKVLIPTFALGRAQELC+LLDDY E M
Sbjct: 199 LITESTYATTIRDSKYAREREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERM 258

Query: 538 NLKVPIYFSAGLVSCAFICY 597
           NLK PIY SAGL   A + Y
Sbjct: 259 NLKFPIYVSAGLTVQANMYY 278


>ref|NP_001063107.1| Os09g0397900 [Oryza sativa Japonica Group]
           gi|50252615|dbj|BAD28786.1| putative FEG protein [Oryza
           sativa Japonica Group] gi|113631340|dbj|BAF25021.1|
           Os09g0397900 [Oryza sativa Japonica Group]
           gi|218202115|gb|EEC84542.1| hypothetical protein
           OsI_31281 [Oryza sativa Indica Group]
           gi|222641522|gb|EEE69654.1| hypothetical protein
           OsJ_29268 [Oryza sativa Japonica Group]
          Length = 559

 Score =  336 bits (862), Expect = 2e-90
 Identities = 166/200 (83%), Positives = 182/200 (91%), Gaps = 1/200 (0%)
 Frame = +1

Query: 1   FTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVG-RGEEEQFTYENILDCMKKVTAVDLK 177
           FTEVCGY+GP+YMTYPTKALAPLMLEDYRKVMV  RGEEEQ++YE+IL CM+KV  +DLK
Sbjct: 82  FTEVCGYHGPVYMTYPTKALAPLMLEDYRKVMVDHRGEEEQYSYEDILRCMRKVIPLDLK 141

Query: 178 QTVQVDKDLQIRAYYAGHVLGAAMFYASVGDAAMVYTGDYNMTPDRHLGAAQIDRLQLDV 357
           QT+QVDKDL IRAYYAGHVLGAAM YA VGDAA+VYTGDYNMTPDRHLGAAQIDRL+LD+
Sbjct: 142 QTIQVDKDLSIRAYYAGHVLGAAMIYAKVGDAAIVYTGDYNMTPDRHLGAAQIDRLKLDL 201

Query: 358 LITESTYATTIRDSKYAREREFLKAVHKCVANGGKVLIPTFALGRAQELCILLDDYGEWM 537
           LITESTYA T+RDSK+AREREFLKAVHKCV+ GGKVLIP FALGRAQELCILLDDY E M
Sbjct: 202 LITESTYAKTVRDSKHAREREFLKAVHKCVSGGGKVLIPAFALGRAQELCILLDDYWERM 261

Query: 538 NLKVPIYFSAGLVSCAFICY 597
           NLK+PIYFSAGL   A + Y
Sbjct: 262 NLKIPIYFSAGLTIQANMYY 281


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